Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01107 ATGACTTGGAAGAGCAGAGGAGAATTGCCTTCTAGAACTGTTATTTCGCAGAGATGGGCACTGTTTTTGTGTTTGGGAAGCTTCTGTGCTGGAATGCTCTTCACTACCAGGATATGGACTATTCCTGAAAACAACAAAGGACTAGCCCGACCAACGGCTGCAGAAGCTGATAAATTGAACGTAGTTTCAGAAGGTTGCAATTCCAGAATTTTGCAAGAATTGGAAATGAAGCGGGATAAAGACATTTATGGTGAAGTTTACAAGAGTCATAATTCCATACAAACATTGGACAAGACTATTTCAAACTTAGAGATGGAATTGGCTGCTGCAAGGGCAACTCAGGAATCTCTACGAAGTGGTGCTCCTGTTTCAGATGATATAAGGATGAGTGAATCATCTGGTAAGAGAAAGTACATTATGGTCGTTGGTATTAATACTGCATTTAGCAGCAGGAAAAGAAGGGACTCGGTTCGTGCCACTTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTTGAGGAGAAGGGCATTATCATCCGCTTTGTAATTGGACACAGTGCTACATCAGGGGGTATTCTTGACAGAGCTATTGAAGCAGAGGATAGGAAGCATGGAGATTTCTTGAGGCTGAATCATGTGGAAGGATATCTTGAATTGTCAGCAAAGACAAAAACCTACTTTGCCACTGCTGTGAACTTATGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCACGTAAATATAGCAACACTGGGAGAAACTCTTGTAAGACACCGATCAAAACCACGGGTATACATTGGATGCATGAAATCTGGGCCAGTCCTATCTCAGAAAGGGGTAAGATACCATGAACCTGAGTACTGGAAATTTGGAGAGGCTGGAAACAAGTATTTCCGACATGCCACAGGGCAGTTGTATGCCATTTCAAACGATTTGGCTACATACATATCAATTAATCAGGATGTTCTTCACAAGTATGCCAACGAGGATGTGTCTCTGGGATCTTGGTTTATTGGACTTGATGTGGAGCATATAGATGATCGAAGACTTTGCTGTGGCACTCCTCCAGATTGTGAGTGGAAGGCCCAAGCAGGCAACATTTGTGTTGCATCGTTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCTGAGAGGATTAAGGAGGTACATAGGAGGTGTGGAGAGGGTGAGAATGCTTTGTGGAGTGCCTCTTTCTAG 1221 0.4316 MTWKSRGELPSRTVISQRWALFLCLGSFCAGMLFTTRIWTIPENNKGLARPTAAEADKLNVVSEGCNSRILQELEMKRDKDIYGEVYKSHNSIQTLDKTISNLEMELAAARATQESLRSGAPVSDDIRMSESSGKRKYIMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISNDLATYISINQDVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERIKEVHRRCGEGENALWSASF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01107 406 Gene3D - 134 351 - -
Spst11g01107 406 Coils Coil 93 113 - -
Spst11g01107 406 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Spst11g01107 406 FunFam Hexosyltransferase 132 352 - -
Spst11g01107 406 Pfam Galactosyltransferase 152 348 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst11g01107 406 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 97 348 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01107 Spst-Chr11 35422779 35426434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01107 1 406 Glycosyltransferase AT1G05170 78.431 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01107 K20855 - gmx:100794838 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01107 11 35422779 35426434 Spst11g01107 11 35422779 35426434 ECH
Spst11g01107 11 35422779 35426434 Spst3g03218 3 82188773 82196404 ECH
Spst5g00734 5 6389949 6393400 Spst11g01107 11 35422779 35426434 PCT