Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02897 ATGAAAACAGACGATGATGCATTTGTTAGGATAGATGAAGTGCTTTCCAGCCTTAAAGAAAAGCCATCAAAAGGCCTCTTATACGGTCTCATTTCTTCTAAATCATCTCCTCAGAGGGATGAGGGAAGCAAGTGGTACATCAGTGAGGAGGAATGGCCACATGATACATACCCACCATGGGCTCATGGTCCTGGCTATGTTATCTCTCGAGACATAGCAAAATTCATTGTCAATGGCCACCAAGAAAGAAAACTCAAGCTCTTTAAATTAGAAGATGTTGCCATGGGCATATGGATTGAACAGTTTGCGAATGGTGGTAAAGAAATGCGTTATATGAACGACGAGAGGTTTTACAATGCCGGGTGTGAATCAAATTATGTACTTGCCCATTATCAAAGCCCAAGGATGGTGCTATGCCTTTGGGAGAAATTGCAGAAAGAACACCAGCCTGTATGCTGTGAGTAA 465 0.4237 MKTDDDAFVRIDEVLSSLKEKPSKGLLYGLISSKSSPQRDEGSKWYISEEEWPHDTYPPWAHGPGYVISRDIAKFIVNGHQERKLKLFKLEDVAMGIWIEQFANGGKEMRYMNDERFYNAGCESNYVLAHYQSPRMVLCLWEKLQKEHQPVCCE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02897 154 Gene3D - 1 147 - -
Spst3g02897 154 Pfam Galactosyltransferase 1 101 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst3g02897 154 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 102 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02897 Spst-Chr3 78597266 78604520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02897 1 154 Glycosyltransferase AT3G06440 70.779 1.41e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02897 K20843 - gmx:100816729 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02897 3 78597266 78604520 Spst3g02897 3 78597266 78604520 ECH
Spst3g02897 3 78597266 78604520 Spst3g02474 3 72425092 72428698 PCT