Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02474 ATGAAGAGGGTGAAGAAGCTAGACCCATTGTTGCTCCTTTCCAATAGGCCTAAGCCTCTTAAAATTTTCATGGTCATGATTTTTCTCTACTTGCTGTTCTCCACCTTTGAAATCGGAACGTCTCTTGCTTTCAAAACCAGGTTTGTGACAGTGTCCTCATTGCTGGGGACTGAAGACCAAGACACCCATCTCAGCAGAGCCTCAAACTTTCCCTCACAAGGGGTGTTCCAAGGTTCAGTGCATCGAAAAACCATGCAGGGGTTGCAGAAAGTTTCCACCTTGAATTTTATTGAGGCTTTGAACGACACTAGTGCTGCTAAAAACGAGGTTTCCGAACTTCACAAGACTGCTAAGCATGCTTGGTTTGAAGGGAAGAGACTCTGGGAAGAGGTTAAGAGTGTGATGAAAACCGACAATCCGGCAAGGTTCAAGGCTGAGAACCTTTCTGATTCGTGTCAGCATTCAATTTCTTTATCTGGTTCTGAATTGAGAGGGGAGAAAGGGGTCATGGTTATGGTGCTTCCTTGTGGGTTGACATTGGGGTCTCATGTTACTGTTGTGGGGACCCCACGTTGGGGTCACTGGGAGGATGATCCTAAGATATCTGCGGTGAAGGAAGGGGAGGGGAAGGTGGTGTCACAGTTTATGATGGAGCTTCAGGGTTTGAAGAGTGTGGACAACGAAGAGCCTCCAAGGATACTGCATTTCAACCCCAGGTTGAAGGGGGATTATAGTAGGAAGCCTGTTATTGAGCAGAACACTGGTTACAGGATGCAGTGGGGTTCTGCTCTCAGGTGTGAGGGATGGAAATCCAGGGCTGATGAGGATACTGTTGATGGACAGGTGAAATGTGAAAAGTGGATTCGTGATGATGATAGCCACGCGGAAGAGGCAAAGGCAACATGGTGGTTAACCAGACTGACAGGGCGAACTAAGAAGGTGACTGTAGATTGGCCATACCCTTTTGTTGAGGGGAGATTATTTGTTCTAACCTTAAGTGCTGGATTGGAAGGGTACCATGTTAGTGTGGATGGAAGGCATGTGACGTCTTTTCCCTATCGCACGGGATTTTCTCTTGAGGATGGGACTGGTCTATCCATAAAGGGGGATGTTGATGTGCACTCTATATTTGCAGCTTCCTTACCGACATCGCATCCAAGTTTTGCTCCACAAATGCATCTTGAATTACTTCCTCAGTGGAAAGCTCCACTGCTTCTCCCTGTAGATGTAGAGCTTTTCATTGGAATACTTTCTGCCGGCAACCATTTTGCTGAACGAATGGCAGTAAGGAAATCGTGGATGCAACATAAGCTAATCAAATCTTCAAATGTCGTGGCTCGGTTCTTTGTTGCCTTGCATGGAAGGAAAGATTTAAATGTGGAGATAAAGAAAGAAGCAGATTATTTTGGCGATATTGTTATTGTCCCTTACATGGATCATTATAACCTAGTTGTGTTGAAGACAATAGCTATCACAGAATATGGGATTCGAATGGCCGCCAAGTATATCATGAAGTGCGATGATGACACATTTGTCAGAGTAGATTCTATGATCAGCGAAGTAAGAAAAGTAGGAAATGGTAGAAGTCTGTATATTGGAAATATGAACTACCACCACAGGCCTCTGCGCAATGGTAAATGGGCAGTAACATATGAGGAATGGTCAAAGGAAGAGTATCCTACCTATGCTAATGGTCCAGGTTATATAATCTCTTCAGACATTGCTCACTTCATTGTATCCAACTTCGAGAAGCACAGATTAAAATTATTTAAAATGGAGGATGTGAGCATGGGAATGTGGGTAGAACAATTCAACAGTTCAAGAGCAGTTGAGTATGTGCACAGTTTGAAGTTCTGCCAATTTGGTTGCATTGAAGATTACTACACTGCACATTACCAATCTCCACGACAAATGACCTGTATGTGGCATAAGTTGCAACACCAGGGAAAACCCATATGTTGCAACATGAGATAA 1974 0.4412 MKRVKKLDPLLLLSNRPKPLKIFMVMIFLYLLFSTFEIGTSLAFKTRFVTVSSLLGTEDQDTHLSRASNFPSQGVFQGSVHRKTMQGLQKVSTLNFIEALNDTSAAKNEVSELHKTAKHAWFEGKRLWEEVKSVMKTDNPARFKAENLSDSCQHSISLSGSELRGEKGVMVMVLPCGLTLGSHVTVVGTPRWGHWEDDPKISAVKEGEGKVVSQFMMELQGLKSVDNEEPPRILHFNPRLKGDYSRKPVIEQNTGYRMQWGSALRCEGWKSRADEDTVDGQVKCEKWIRDDDSHAEEAKATWWLTRLTGRTKKVTVDWPYPFVEGRLFVLTLSAGLEGYHVSVDGRHVTSFPYRTGFSLEDGTGLSIKGDVDVHSIFAASLPTSHPSFAPQMHLELLPQWKAPLLLPVDVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSNVVARFFVALHGRKDLNVEIKKEADYFGDIVIVPYMDHYNLVVLKTIAITEYGIRMAAKYIMKCDDDTFVRVDSMISEVRKVGNGRSLYIGNMNYHHRPLRNGKWAVTYEEWSKEEYPTYANGPGYIISSDIAHFIVSNFEKHRLKLFKMEDVSMGMWVEQFNSSRAVEYVHSLKFCQFGCIEDYYTAHYQSPRQMTCMWHKLQHQGKPICCNMR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02474 657 Gene3D - 165 377 - -
Spst3g02474 657 CDD GLECT 174 377 IPR001079 GO:0030246
Spst3g02474 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 172 377 IPR013320 -
Spst3g02474 657 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 345 606 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst3g02474 657 FunFam Hydroxyproline O-galactosyltransferase GALT2 293 377 - -
Spst3g02474 657 FunFam Hydroxyproline O-galactosyltransferase 404 645 - -
Spst3g02474 657 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 170 379 IPR001079 GO:0030246
Spst3g02474 657 Pfam Galactoside-binding lectin 171 377 IPR001079 GO:0030246
Spst3g02474 657 Pfam Galactosyltransferase 425 605 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst3g02474 657 Gene3D - 408 651 - -
Spst3g02474 657 SMART Gal_bind_lectin_2 174 378 IPR001079 GO:0030246
Spst3g02474 657 FunFam Hydroxyproline O-galactosyltransferase GALT4 169 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02474 Spst-Chr3 72425092 72428698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02474 1 657 Glycosyltransferase AT1G74800 59.765 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02474 K20843 - gmx:100814480 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02474 3 72425092 72428698 Spst3g02474 3 72425092 72428698 ECH
Spst3g02897 3 78597266 78604520 Spst3g02474 3 72425092 72428698 PCT