Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02589 ATGGCTGTAGATGTGTTTCCCTGGACAAAATCAAAACCCAGGAAGACACAACCTCGTTCCGTTGGTGGAACAAGACAACACAAATGTGGACAAGCACACACAAATTTGTCAACATACAGGAGCAAACGAAGTTTCCCAAACATGGCTTTTAGCCTATGTTTACGCTTCCCAATCATTTCTCTCCTTGTACATTTCCTCCTTGTCGTATCTACCCTTTGTCCTGTTCATTCTTCACAATTTGGTAACCACCCAGTTGCTAATCAAACTTTTCGGCCAAAGGACGAGCTGCGCAAGTTGAACGCCATAAGACTTCGGCTTCAGCAAATCAACAAACCTCCTGTTAAGACAATTCAGAGTCCTGATGGAGATATAATAGACTGTGTTGTGTCTCATAAGCAACCAGCTTTTGATCATCCTCTAATGAAAGGACACAAACCATTGGATCCTCCAGAAAGACCAAGAGGGCATAACCAAATGGATGATTTGAGTGAGAACTTTCAGTTGTGGAGCTTGTCTGGTGAGTCGTGTCCAGAAGGAACAATTCCGATTAGAAGAACAAGGGAGGAAGACATGTTAAGAGCTAGCTCTGTTCGCAGATTTGGAAGGAAAAAAATACTGAAACGTGTCAGAAGAGACACCAGCGGCAATGGACATGAGCATGCAATTGGGTATGTGACAGGGGATGAGTACTACGGAGCAAAGGCTAGCATAAACGTGTGGGCACCCCTTGTGGAAAACCCAAATGAATTCAGCTTGTCTCAAATGTGGGTCATTTCTGGTTCATTTGCGGATGATCTTAACACCATTGAAGTGGGTTGGCAGGTCAGCCCAGAGCTATATGGGGACAGGTACCCTAGATTCTTCACTTATTGGACGACAGATGCATATCAAGCAACTGGCTGTTACAATTTACTCTGCTCAGGCTTTGTTCAAACAAACAGTAAAATTGCAATTGGAGCAGCAATCTCTCCAACTTCTTCATACGGTGGTGGCCAATTTGATATTAGCTTGCTCATCTGGAAGGATCCAAAGCATGGGAATTGGTGGCTTGAATTTGGAGCAGGGACCCTTGTTGGGTACTGGCCATCGTTCTTGTTCACGCACTTAGGGGATCATGCAAGCATGATTCAATTTGGGGGAGAAACAGTGAATTCAGCCTCATCAGGGTCTCACACTTCCACTCAAATGGGTAGTGGACATTTTGCAGAGGAGGGTTTTGGAAAAGCTTCATATTTCAGGAACATGCAAGTTGTGGATTGGGACAACAACTTGATTCCCTTGTCAAATCTAAAGGTTCTAGCTGATCACCCCAATTGCTATGACATACAAGGAGGGGTTAATAATGCATGGGGGAATTATTTTTACTATGGTGGACCTGGAAGAAATGTAAAGTGTCCCTAA 1401 0.4397 MAVDVFPWTKSKPRKTQPRSVGGTRQHKCGQAHTNLSTYRSKRSFPNMAFSLCLRFPIISLLVHFLLVVSTLCPVHSSQFGNHPVANQTFRPKDELRKLNAIRLRLQQINKPPVKTIQSPDGDIIDCVVSHKQPAFDHPLMKGHKPLDPPERPRGHNQMDDLSENFQLWSLSGESCPEGTIPIRRTREEDMLRASSVRRFGRKKILKRVRRDTSGNGHEHAIGYVTGDEYYGAKASINVWAPLVENPNEFSLSQMWVISGSFADDLNTIEVGWQVSPELYGDRYPRFFTYWTTDAYQATGCYNLLCSGFVQTNSKIAIGAAISPTSSYGGGQFDISLLIWKDPKHGNWWLEFGAGTLVGYWPSFLFTHLGDHASMIQFGGETVNSASSGSHTSTQMGSGHFAEEGFGKASYFRNMQVVDWDNNLIPLSNLKVLADHPNCYDIQGGVNNAWGNYFYYGGPGRNVKCP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02589 466 Pfam Neprosin activation peptide 116 224 IPR025521 -
Spst3g02589 466 MobiDBLite consensus disorder prediction 13 28 - -
Spst3g02589 466 MobiDBLite consensus disorder prediction 1 28 - -
Spst3g02589 466 FunFam Putative carboxyl-terminal proteinase 239 358 - -
Spst3g02589 466 Gene3D - 243 353 - -
Spst3g02589 466 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 102 462 - -
Spst3g02589 466 Pfam Neprosin 248 459 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02589 Spst-Chr3 74330439 74334371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02589 - - gmx:100788950 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02589 3 74330439 74334371 Spst3g02589 3 74330439 74334371 ECH
Spst3g02589 3 74330439 74334371 Spst2g01577 2 14506074 14515214 PCT