Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02550 ATGCACGACATGACAACCCTCTCTCTCTTTCTCGTTCTCCTTCTTACAGGGCTCAGTGTGGGTTTGGGTGGTCGTGACTTGGGAGATAAAAACCCCTTTACGCCAAAGGCTTCAGCGGCACGCTACTGGGACAAACACGTCCGCAACACCTTCCACAAGCCCTCCTTCCTACTCTCCAAGGCCTCCCCAATGACCGCCGCCGACACCGCCTCATTCACCAAGCTTGCCGCCACCAACACCCTCTCCGCACGCTTGCCGGAGTTCTGCTCCTCCGCCCACCTTCTCTGCTTCCCGGAGGTCCGTTCAAGCCTGGAGAAACACGCTGTAGATGAGAATTTTCAAACCTACAACGACGGCCAGAACTTCACTAATTACGGAACGAGTAGAGCCGGCGGAATCGACACGTTCAAGAACTACTCCAACGATATCTTTAGCACTCCGGTCAACGATTTCCGTCGATACAGCCGCGGAGCTGCTGGACACCAAGAAACCTTCACCGGCTACGCCACTGACACCAACGTCGCAGACCAGAGCTTCAACACGTACGGCATCAACACCGGCGGAGGCTCCAGCGAGTTCAAAAATTACTCGAGAAATTCAAACGTCCCTGACCTGCGATTCACCACCTACTCCGACAGCTCTGCTGGGAGGACGCAGACTTTTTCCAGCTACAGCGAGAACGGAAACGCCGGTGGCCAGACATTCCGGAGCTACGGCAAGAACTCCGCTGGAGCCGCAAATGATTTCACAGCCTACGGAACAGACTCCAACGTGGCCTCCTCTGGCTTCACCAACTACGGCAAGGGAGGCGCGGGTCCCAATGATACATTCACAAACTACGGCGTTAACATGAACGATCCCCAAGAGAACTTCCAAAGCTACGCAGACGGAACCGTTGGTGGGACGCAGAGTTTCTCCAACTACAGGGACCAAGCTAACGTAGGTGACGATTCCTTCCAATCCTACGCTAAGAACACGTTAGGGTCCGATGTGGGTTTCAAAAACTACGGTAACACCGCCAACCCTGGTTCAGACACTTTCAAAGGCTACGCTAAAGGAGCAGAACAAGGAACCAAGGTTGGCTTCACCGGCTACGGTGTTAACACAAACACTACGTTTAAGGATTACGCCAAAGAGGGTATTTCCTTCGCTGCTTACAACACCTCTTCCTCTCCCTCTTCCGCTTCTAAAACCGTTAGTGAGAGTTTGGTGAAAAGGTGGGTTGAGCCGGGTAAGTTTTTTCGTGAGAGCATGCTTAAGGAAGGAACTGTCATGCCCATGCCAGACATAAGGGATAAAATGCCACAAAGGTCGTTTTTGCCCCGCTCCATTTTGGCGAAACTGCCCTTCTCTTCTTCAAAGGTTGAGGAGTTGAAGCGCGTCTTCAAGGTGTCTGATAACTCCTCCATGGACAAGATGATCATGGACTCTTTGACTGAGTGCGAGAGAGCACCCAGCGTCGGAGAGATCAAGCGTTGTGTGGGTTCTGTCGAGGATATGATTGTTTTTGCAACCTCTATTTTGGGCCGCAATGTGGCGGTTTGGACCACTGAGAACGTAAATGGGTTCAATAAGAATGTGATGGTGGGTCGGGTCAAAGGGATGAACGGTGGGAAGGTAACCCAATCCGTCTCGTGCCACCAGAGCTTGTTCCCTTACCTGCTGTACTACTGTCACTCCGTTCCCAAGGTTCGGGTCTATGAAGCGGATCTACTTGACCCGGAATCGAAGGCCAAGATTAACCACGGTGTTGCTATCTGTCACTTGGACACCACTGCATGGAGCCCCACCCACGGCGCTTTCATAGCCCTTGGATCGGGTCCGGGTCAGATTGAGGTGTGCCATTGGATATTCGAGAATGACATGACTTGGACCATTGCTGATTAG 1887 0.5252 MHDMTTLSLFLVLLLTGLSVGLGGRDLGDKNPFTPKASAARYWDKHVRNTFHKPSFLLSKASPMTAADTASFTKLAATNTLSARLPEFCSSAHLLCFPEVRSSLEKHAVDENFQTYNDGQNFTNYGTSRAGGIDTFKNYSNDIFSTPVNDFRRYSRGAAGHQETFTGYATDTNVADQSFNTYGINTGGGSSEFKNYSRNSNVPDLRFTTYSDSSAGRTQTFSSYSENGNAGGQTFRSYGKNSAGAANDFTAYGTDSNVASSGFTNYGKGGAGPNDTFTNYGVNMNDPQENFQSYADGTVGGTQSFSNYRDQANVGDDSFQSYAKNTLGSDVGFKNYGNTANPGSDTFKGYAKGAEQGTKVGFTGYGVNTNTTFKDYAKEGISFAAYNTSSSPSSASKTVSESLVKRWVEPGKFFRESMLKEGTVMPMPDIRDKMPQRSFLPRSILAKLPFSSSKVEELKRVFKVSDNSSMDKMIMDSLTECERAPSVGEIKRCVGSVEDMIVFATSILGRNVAVWTTENVNGFNKNVMVGRVKGMNGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKAKINHGVAICHLDTTAWSPTHGAFIALGSGPGQIEVCHWIFENDMTWTIAD 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02550 628 ProSiteProfiles BURP domain profile. 413 627 IPR004873 -
Spst3g02550 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 16 628 - -
Spst3g02550 628 Pfam BURP domain 413 625 IPR004873 -
Spst3g02550 628 MobiDBLite consensus disorder prediction 210 229 - -
Spst3g02550 628 SMART BURP_2 411 627 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02550 Spst-Chr3 73680044 73682025 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02550 - - gmx:100779518 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02550 3 73680044 73682025 Spst3g02550 3 73680044 73682025 ECH
Spst3g02550 3 73680044 73682025 Spst3g02548 3 73641986 73643824 PCT