Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02532 ATGAATACCTTCTCTTCTCCCACGCGTCTGAGGGACATGATCCGGGCCATGCGTGCTTGCAAAACTGCAGCAGAAGAACGTGCTGTTGTAAGAAAAGAATGTGCTGCCATCCGTACTTCTATAAATGAAAATTATCAGGACTATAGGCATCGGAATCTGGCTAAGCTAATGTTCATCCACATGCTTGGCTACCCCACTCATTTTGGTCAAATGGAGTGCCTCAAGTTGATAGCATCTCCTGGATTTCCGGAGAAGAGAATGGGTTACCTTGGCCTTATGTTGCTTCTCGATGAAAAACAAGAAGTTCTAATGGAGCTAGCAATATTGGAAAAGGTCGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAAATTACTGCATTTTCGAGATCCAAATATTCGGAAGAAGGCAGCATTGTGCTCTGCAAGAATTATAAAGAAAGTTCCAGACATGGCCGAAAATTTTGTTGATTCTACTACTGCCTTACTAAGGGAGAAGCATCATGGAGTTTTGATCACTGGGGTTCAGCTTTGTACTGATCTATGCAAAATTAGCTCAAAAGCTCTTGAACATGTTAGAGAGGGTCGTGGAGGCCACTTTGGTTGTAGTGGAAGAGTTCACAGTGGTCGTAATTCTATATTATGTCAAAAATGCACGGAGGGTTTGGTCAGAGTTCTAAAGGATTTAGTAAGCAATCCCTATTCCCCAGAGTATGATGTTGCTGGTTTCACCGACCCTTTTCTGCATATCAGATTGCTTAGACTGTTGCGGGTATTGGGTGAAGGTGATGCTGATGCTAGTGATTCTATGAATGACATACTTGCCCAGGTGGCTACAAAGGTTGAGTCAAGTAAAATTATTGGGAATGCCATCTTATACGAGTGTGTTCAAACAATAATAAGCATTGAAGATAATGGTGGCTTACACGTGCTTGCCATCAATATTCTAGGAAAGTTCTTGTCGCACCAAGACAACAATATCAGTTTTCCGTCCCTCTTCCTTGTTGTACTCTTATTCCTACAGGTTTTGCCTTATATCCTTTGTGACATTGCTAATGCTCTTGACTTGTCAAACCGATCGCCTTGCTGGAATCATGTTGTGTCGATTTACGCAACCCTCAAAAATCCTCCCACTTGCCTCAGTGCAGCTTTGCTTCCCTTGGCGGCGTGTGTGGTTGGACCACCTCTCTCCTAG 1194 0.4338 MNTFSSPTRLRDMIRAMRACKTAAEERAVVRKECAAIRTSINENYQDYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRMGYLGLMLLLDEKQEVLMELAILEKVEMARDLAPEVEKLLHFRDPNIRKKAALCSARIIKKVPDMAENFVDSTTALLREKHHGVLITGVQLCTDLCKISSKALEHVREGRGGHFGCSGRVHSGRNSILCQKCTEGLVRVLKDLVSNPYSPEYDVAGFTDPFLHIRLLRLLRVLGEGDADASDSMNDILAQVATKVESSKIIGNAILYECVQTIISIEDNGGLHVLAINILGKFLSHQDNNISFPSLFLVVLLFLQVLPYILCDIANALDLSNRSPCWNHVVSIYATLKNPPTCLSAALLPLAACVVGPPLS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02532 397 Gene3D - 1 391 IPR011989 -
Spst3g02532 397 Pfam Adaptin N terminal region 109 332 IPR002553 GO:0006886|GO:0016192|GO:0030117
Spst3g02532 397 Pfam Adaptin N terminal region 27 104 IPR002553 GO:0006886|GO:0016192|GO:0030117
Spst3g02532 397 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 112 329 - -
Spst3g02532 397 SUPERFAMILY ARM repeat 25 350 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02532 Spst-Chr3 73366964 73378071 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02532 K12391 - gmx:100817075 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02532 3 73366964 73378071 Spst3g02532 3 73366964 73378071 ECH
Spst3g02532 3 73366964 73378071 Spst3g02531 3 73349466 73364166 PCT