Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02531 ATGCACAAGACCTACCTTGTGCTGAATTTTAAATTTGAAGATTTAAGATATGTGGGGTTAAACATGTTGATGAAGGCTGTTAGTGTTGATGGTCAGGCAGTGCAAAGGCATCGTACAACAATTCTGGAATGTATAAAGGATTCTGATGCTTCTATTCGGAAAAGAGCCCTTGAACTTGTTTATATTCTGGTGAATGAAACTAATGTGAAGGCCATAACAAAGGAGCTAGTAGACTATCTGGAAGTCAGTGATCTAGATTTCAGGGTAGACCTTACTGAAAAAATTTGTTCAATAGTTTCAAAGTATTCCCCAGACAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTGTCTGAGGCTGGAAATGTTGTGAAAGATGAAGTATGGCATGCCTTAATTGTTGTGATAAGCAATGCTTCTGAGCTTCATGGATATACAGTAAGAGCATTATACAAGGCATTTCAGAGATCAGTTGAACAGGAAACTCTTGTTCGCGTTGCAGTGTGGTGCATTGGAGAGTATGGTGACATCCTACTCAATAATATTGGATTGCTTGATGTTGAAGATCCAGTAACGGTCAGCGAGTCAGATGTTGTGCACATTGTAGAGATTGCTTTAGAACGCCATACATCGGATCTTACCACAAAAGCAATGACTTTGGTTGCCCTATTGAAGCTATCTGCACGGTTTCCTTCTTGTTCAGAGAGAATCAGGGAATTAGTCGTTCAGTACAATGGGAACTTTGTGTTGGAATTGCAGCAAAGATCCATAGAATTCAATTTGATTATTGCAAAGCATCAAAATATTAGGCGTACACTTGTAGAGAGGATGCCAGTTCTGGATGAGGCTACATTCATTGCTAGGAGGGCGGGACCTTTGTCTGATGCAGGTTTAACACGTACAAATGGAGTAGCCAAATCTGTGGCTCCTATTGCAGATCTTCTTGATATAAAATCAGATGATGCTCATGTACCAAGTTCTTCGGATGGTGATCTTCTTCATGACCTTCTTGGTGTTGATCTTTCACTGCCATCTCAACAGTCTGATGCTAGTCAACCTTCAAAAAATGGCACAGATGTTCTTTTGGATCTTTTATCTATTGGATCGACTTCTGCACCTACTGAATTACCTGTAGAAAGCACCTCATCGACGATTGACATATTGTCTCCCAAACCAAGTAAGAAGGCACCAGTTTCACCATTAGATGATCTAGCATCACTTTCACTTTCTTCTAGAGAAACTTTAAATGCTGGAGCTACTCCCAAGATGGATTCATTAGATGGTTTTTCCCCCAGCCCACCAACAAAAGAAAACAATGAACTAGTTTATCCATCTATAACTGTATTTGAGAGTAGCTCCTTGAGGTTGGTGTTCAATTTCTCAAAACAGCCTGGAAACTCTCAAACAACGAATATTCAGGCTACCTTCACAAATTTGACCTCAAATGTATATACGGATTTTGTTTTTCAGGCTGCGGTTCCAAAGGTATGCCAGTTGGTATATGCTGTTGAGTGGCAGCTTTCTGCATGTACTGTTAAGATCATCATTCACATGGTGTTTATTATATAA 1569 0.3983 MHKTYLVLNFKFEDLRYVGLNMLMKAVSVDGQAVQRHRTTILECIKDSDASIRKRALELVYILVNETNVKAITKELVDYLEVSDLDFRVDLTEKICSIVSKYSPDKIWYIDQMLKVLSEAGNVVKDEVWHALIVVISNASELHGYTVRALYKAFQRSVEQETLVRVAVWCIGEYGDILLNNIGLLDVEDPVTVSESDVVHIVEIALERHTSDLTTKAMTLVALLKLSARFPSCSERIRELVVQYNGNFVLELQQRSIEFNLIIAKHQNIRRTLVERMPVLDEATFIARRAGPLSDAGLTRTNGVAKSVAPIADLLDIKSDDAHVPSSSDGDLLHDLLGVDLSLPSQQSDASQPSKNGTDVLLDLLSIGSTSAPTELPVESTSSTIDILSPKPSKKAPVSPLDDLASLSLSSRETLNAGATPKMDSLDGFSPSPPTKENNELVYPSITVFESSSLRLVFNFSKQPGNSQTTNIQATFTNLTSNVYTDFVFQAAVPKVCQLVYAVEWQLSACTVKIIIHMVFII 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02531 522 MobiDBLite consensus disorder prediction 372 400 - -
Spst3g02531 522 MobiDBLite consensus disorder prediction 372 389 - -
Spst3g02531 522 Pfam Adaptin N terminal region 13 264 IPR002553 GO:0006886|GO:0016192|GO:0030117
Spst3g02531 522 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 441 522 IPR008153 -
Spst3g02531 522 SUPERFAMILY ARM repeat 14 280 IPR016024 -
Spst3g02531 522 Pfam Adaptin C-terminal domain 444 499 IPR008152 GO:0006886|GO:0016192
Spst3g02531 522 Gene3D - 6 281 IPR011989 -
Spst3g02531 522 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 14 499 - -
Spst3g02531 522 SUPERFAMILY Clathrin adaptor appendage domain 422 500 IPR013041 -
Spst3g02531 522 Gene3D - 441 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02531 Spst-Chr3 73349466 73364166 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02531 K12391 - gmx:100817075 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02532 3 73366964 73378071 Spst3g02531 3 73349466 73364166 PCT