Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02495 ATGAGTGGCTATTATGGTGCAATCTTACTGGCAGAAATCAAGGAAATTAGTGAGAAGAAACGAAAAGAAGATGATATTCTTCTTGCAATTGCTGCTGGAAACAGACAGCCTATTATTCCTCACTTGGAATTTGTGTATCCTGATCCAGAGATTCATGAAGATCTGTATCAACTCATCAAATATTCCTGTGGAGAAATGTGTACAACTGATCAGTTGGATAAAGCTATGAAAATTTGGACAACATTTTTAGAACCCGTGCTTGGAGTTCCTTCTCGATCCCAAAGTCCGGAGGATACAGAAGATGTTGTTAAGGATAAGAATAATTCTGCCAAAAGTGGCACTGAAATTGGTGATGATGCTAGTCCTGTAATGAATCCTAAGAATTTAAACATTAACAGAAATGGGGATGAAAACTATCCACTTGAACAATCTCATTCCTGCAAACAATGGCAACCAAGTGGAGATAATAAGGTTAAAGAGGATAATCATCTTGATTCAGACCTCTCTGCACATAAGACTGAAGCCGTAGGAAGTAGTACACAGCAGGGTAAAATGAATATAAATGCATCTCTACCTGATGAAGTATCAAGAGCCAGTAAGCAAGATCGTTCCACTGAACGGTTGGTTAATGTCAACGTCTCGCTGTCATCGGCTATGGAGCAAAGTAATAGAAGAATGAATGTGGATAAGGCATCAGGACTTGTTGCTACTCCATCAAGACCTGGTAATATACCTACTGTGGGAGGAGTTGATTTACCTTCTTTAGAGGGTGCTGATTCTACAAGACCAGTGACATCCACTAATGGCCCCATCATTGAGGACACTAAAGTTCGCAGATATCATGAAGAATCAGTTGGACTCTTCAGAAGTGAAAGAGAAGAGGGTGAGCTATCACCCAACGGAGACCTTGAAGAGGATAACTTTGCAGCTTATGGGCATACTGATTCGGAGGCAGTTCATAAAGGAAAAGATGGTACCATTTGCCGACAATACCAAAACAGACATGGACAAGAAATTCATGGTGAAGTAGGAGGAGAAATTCATGGTGAAGTAGGAGGAGAAAATGATGCTGATGATGAAGGAGAAGAAAGTCCCCATAGATCATTGGAGGACAGTGAGAATGCTTCTGAAAATGGTGATGTTTCTGGTACTGAGTCTGCTGATGGTGATGAGTGTTCTCGAGAACATGAGGATGGGGATCATGACCATGATAACAAGGCTGAGAGTGAAGGTGAGGCAGAAGGAATCGCTGATGCCAATGATGTTGAAGGAGATGGTGCCTCATTGCCATTTTCAGAGCGGTTTCTTGTCAATGTAAAGCCTTTGGCAAAACATGTTCCTCCAGTGTTGCATGAGAAAGAAAGGACTGTTAGAGTCTTTTATGGAAATGATTCCTTCTATGTGCTGTTTAGACTTCATCAGACATTGTATGAGAGGATACAGTGTGCAAAGGTTAATTCATCATCTGCTGAAAGGAAGTGGAGGGCTTCAAATGATACAAACTCTACTGATCAATATGGCAGGTTTTTGAACGCCCTTTACAATTTACTGGATGGTTCTTCTGATAGTACAAAATTTGAGGATGACTGTCGAGCTATTATTGGAACTCAATCGTATGTCTTATTCACATTAGACAAGTTGATATATAAACTTGTTAAACAGCTTCAAGCTGTTGCGGCCGATGAGATGGATAACAAGCTGCTTCAACTATATGCATATGAAAAATCAAGAAAACCTGGAAGATCTGTTGATTTAGTTTGTCATGAAAATGCTCGTGTTCTTCTTCATGATGAGAACATATATCGTATTGAATGTTCACCTGCACCTACCCAATTGTCTATTCAACTGATGGACTATGGATTTGATAAGCCTGAAGTGACTGCTGTGTCAATGGACCCTAATTTTTCAGCTTATCTGCACAATGACTACCTATCCATTGTCCCTGACAAAAAGGAGCAATCAGGAATATACCTGAAGAGGAATAAGCGCAAGCAGGGCAGTCGTGATGAATTTTCAAGCCAGGCCATGGATGGACTACAAATTATCAATGGACTGGAGTGTAAGATAGCTTGCAATTCGTCTAAGGTTTCATACGTTTTAGATACTGAAGACTTTTTATATCAAACAAGAAGAAAAAAAAGGAGGACCTTGCATCAGAGCAGTTCATGCCTTGAACAATCACAGTCCTTAATCATTTCTTCAAGCAGAGAACAACGGGTCTGCAAATTATTTTCAATTTGA 2241 0.4007 MSGYYGAILLAEIKEISEKKRKEDDILLAIAAGNRQPIIPHLEFVYPDPEIHEDLYQLIKYSCGEMCTTDQLDKAMKIWTTFLEPVLGVPSRSQSPEDTEDVVKDKNNSAKSGTEIGDDASPVMNPKNLNINRNGDENYPLEQSHSCKQWQPSGDNKVKEDNHLDSDLSAHKTEAVGSSTQQGKMNINASLPDEVSRASKQDRSTERLVNVNVSLSSAMEQSNRRMNVDKASGLVATPSRPGNIPTVGGVDLPSLEGADSTRPVTSTNGPIIEDTKVRRYHEESVGLFRSEREEGELSPNGDLEEDNFAAYGHTDSEAVHKGKDGTICRQYQNRHGQEIHGEVGGEIHGEVGGENDADDEGEESPHRSLEDSENASENGDVSGTESADGDECSREHEDGDHDHDNKAESEGEAEGIADANDVEGDGASLPFSERFLVNVKPLAKHVPPVLHEKERTVRVFYGNDSFYVLFRLHQTLYERIQCAKVNSSSAERKWRASNDTNSTDQYGRFLNALYNLLDGSSDSTKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQAVAADEMDNKLLQLYAYEKSRKPGRSVDLVCHENARVLLHDENIYRIECSPAPTQLSIQLMDYGFDKPEVTAVSMDPNFSAYLHNDYLSIVPDKKEQSGIYLKRNKRKQGSRDEFSSQAMDGLQIINGLECKIACNSSKVSYVLDTEDFLYQTRRKKRRTLHQSSSCLEQSQSLIISSSREQRVCKLFSI 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02495 746 MobiDBLite consensus disorder prediction 345 413 - -
Spst3g02495 746 MobiDBLite consensus disorder prediction 97 112 - -
Spst3g02495 746 MobiDBLite consensus disorder prediction 125 153 - -
Spst3g02495 746 MobiDBLite consensus disorder prediction 174 195 - -
Spst3g02495 746 MobiDBLite consensus disorder prediction 174 206 - -
Spst3g02495 746 MobiDBLite consensus disorder prediction 89 162 - -
Spst3g02495 746 MobiDBLite consensus disorder prediction 387 413 - -
Spst3g02495 746 PANTHER SIN3B-RELATED 9 604 IPR039774 GO:0003714
Spst3g02495 746 MobiDBLite consensus disorder prediction 345 374 - -
Spst3g02495 746 MobiDBLite consensus disorder prediction 287 307 - -
Spst3g02495 746 Pfam C-terminal domain of Sin3a protein 460 706 IPR031693 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02495 Spst-Chr3 72758720 72763256 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02495 K11644 - gmx:100781798 1174.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02495 3 72758720 72763256 Spst3g02495 3 72758720 72763256 ECH
Spst3g02494 3 72747309 72751511 Spst3g02495 3 72758720 72763256 PCT