Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02475 ATGAAAATCCAAACCAACGATCTTAAGTACATTTTCCGTTGCAAGACATCACTCCATAAGATCCACCTTCATTTGCTAGCCTATAACAACATGGATCATCAGCTGCTACAGGTAGTTGCACTGCTGACAGTGATAGCATTTGGAGGCAGGAGTTGGACTATAGAAGCCTGCAGCCACATTGACTTGGAAGCTTTGCTGAGTTTCAAGAATGCAATTCACAAGGACGAATCTGGTCGCTTAGCTAAGTGGATTGGTGAGAGCTGCTGCAAGTGGGAAGGTATTGTCTGTGAAAATGCAACCACTAGAGTTATACAGATCAATCTTCCAGGATTCATTTCCACAGACACAGATTTATTTCAAACACAAATGATAGGGCGGATTTCTCCTTCCATAACACTCCTCACCTCCCTTGAAATCATTGATCTTGGTGGTTTAGTTGGTCTTAGTGGAGCTATTCCACATACCATTGGTTTGAACCTGCCAAAGCTCCAAAAGCTCTACCTTTATGGGAACAATTTAACTGGTTCAATACCAGAAAGCATTGGACAGTTGCCAAACCTCCAAGAACTAGCTCTGCAGGAAAATCGGCTATCGGGGTTCATCCCTATGAGCCTTGGAAACCTTAAAAGTCTCAAGAGGTTGCTGCTTTATTCAAATAAATTTTCAGGTATAATATCAGACTCACTTGGGAATTTGATAAATTTGGTAGAATTGGATGCTCATGACAATGCCCTTGTGGGTAATATACCCAATAGTGTTGGTGAGATGAAGGCTTTGGAAAAGCTTGATCTTTCAAACAATTTGCTAAGCGGGAAGATACCTTCTTCATTAACTAATTTAACTGCCATTTCAGTTTTGTATCTGAACACCAACTATTTTGAGGGAAGCATACCATTTCCTTCAAGATCTGGTGAAATGTCTTCTCTGGGCTTCTTAAGACTCCATAATAATCTCCTTGTTGGAAGTATACCTGCCAATATTGGCTATTTGGTATCTCTTCAAAGAGTTTCACTATCAAACAACAAACTTGAAGGAGCACTGCCATCTAGTGTAGGCAATTTGGTATCACTGACTGAGTTATATCTCAGTGGTAACTTCTTATCTAATCAAATACCAAAATCAGTAGGCCAACTTTCTCGGCTCATAATGTTGAACATCTCTAGAAACTTGATTGAAGGGCCATTACCTCAAGAGATGTCTTCCCTTCAAAATCTTCAAACACTTGATCTTTCTTTCAACCATCTGAATCTCTCAGCCATTCCAAAATGGATGGCAAACATGTCATCAATTTCCAACATATACTTTGCTGGTTGTGGAATCCAGGGCCAAATTCCAGATTTTCTCCAAACAACCAATAGTCCAATACAGGAACTGGACTTGTCAGTTAATCTTCTCAGTGGAAGCATACCACCATGGATAGGAAGCCTCAGTCGACTCTACTTGTTAAATCTCTCAAGGAACTATCTTTATTCAGACATCCCTGATTCTTTTAGAAATTTGCAAGATCTAGGTGTCCTTGATCTTCACTCAAATAAACTAACAGGCTCCATAGCTCCAGTATTTGATATAGAACAAGGTATGTTCGGGGGTTCACTGAAATTTGTTGATCTTTCTGAAAACAACTTCTCAAGTGGAATGGAGAAAATTGGTGGAGGGGAATGTAGTACTCAGTTTGTGAATTTGTCTCATAACCATCTGGAAGGTAGGATACCAAATTCAATTGGGAGATTGAATTCACTTTACAGTTTGGATTTGAGCTTCAACGAATTAGGCTCCAATTTGCCAGAAGTGCTGGCAAATTTAACCGCATTGGAGATATTGAAGCTACAGGAAAATCACTTCACTGGTAAAATTCCAAACGAATATCTCAAGTTGTTGAAGCTGAAGGAACTAAACGTATCTAACAATGATCTTGAAGGGAAAATTCCAGAGGGCAAACCTTTGATTGATTTTCCTGAGAGTTCATATTCTGGAAACAAAGGGTTATGTGGAAAGCCTCTCGGTCCTTGTAAACTTTGA 2019 0.3962 MKIQTNDLKYIFRCKTSLHKIHLHLLAYNNMDHQLLQVVALLTVIAFGGRSWTIEACSHIDLEALLSFKNAIHKDESGRLAKWIGESCCKWEGIVCENATTRVIQINLPGFISTDTDLFQTQMIGRISPSITLLTSLEIIDLGGLVGLSGAIPHTIGLNLPKLQKLYLYGNNLTGSIPESIGQLPNLQELALQENRLSGFIPMSLGNLKSLKRLLLYSNKFSGIISDSLGNLINLVELDAHDNALVGNIPNSVGEMKALEKLDLSNNLLSGKIPSSLTNLTAISVLYLNTNYFEGSIPFPSRSGEMSSLGFLRLHNNLLVGSIPANIGYLVSLQRVSLSNNKLEGALPSSVGNLVSLTELYLSGNFLSNQIPKSVGQLSRLIMLNISRNLIEGPLPQEMSSLQNLQTLDLSFNHLNLSAIPKWMANMSSISNIYFAGCGIQGQIPDFLQTTNSPIQELDLSVNLLSGSIPPWIGSLSRLYLLNLSRNYLYSDIPDSFRNLQDLGVLDLHSNKLTGSIAPVFDIEQGMFGGSLKFVDLSENNFSSGMEKIGGGECSTQFVNLSHNHLEGRIPNSIGRLNSLYSLDLSFNELGSNLPEVLANLTALEILKLQENHFTGKIPNEYLKLLKLKELNVSNNDLEGKIPEGKPLIDFPESSYSGNKGLCGKPLGPCKL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02475 672 SUPERFAMILY L domain-like 206 446 - -
Spst3g02475 672 PRINTS Leucine-rich repeat signature 402 415 - -
Spst3g02475 672 PRINTS Leucine-rich repeat signature 259 272 - -
Spst3g02475 672 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 300 394 - -
Spst3g02475 672 PANTHER LEUCINE RICH REPEAT KINASE 2 114 450 - -
Spst3g02475 672 Gene3D Ribonuclease Inhibitor 301 550 IPR032675 -
Spst3g02475 672 Gene3D Ribonuclease Inhibitor 116 300 IPR032675 -
Spst3g02475 672 Gene3D Ribonuclease Inhibitor 556 670 IPR032675 -
Spst3g02475 672 Gene3D Ribonuclease Inhibitor 54 115 IPR032675 -
Spst3g02475 672 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 395 672 - -
Spst3g02475 672 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 113 299 - -
Spst3g02475 672 Pfam Leucine Rich Repeat 259 280 IPR001611 GO:0005515
Spst3g02475 672 Pfam Leucine Rich Repeat 627 644 IPR001611 GO:0005515
Spst3g02475 672 Pfam Leucine rich repeat 152 197 IPR001611 GO:0005515
Spst3g02475 672 Pfam Leucine rich repeat 357 415 IPR001611 GO:0005515
Spst3g02475 672 SMART LRR_typ_2 330 353 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 256 280 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 500 530 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 577 600 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 402 427 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 160 183 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 601 625 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 354 378 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 184 207 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 208 231 IPR003591 -
Spst3g02475 672 SMART LRR_typ_2 476 499 IPR003591 -
Spst3g02475 672 SMART LRR_sd22_2 577 596 - -
Spst3g02475 672 SMART LRR_sd22_2 160 186 - -
Spst3g02475 672 SMART LRR_sd22_2 354 375 - -
Spst3g02475 672 SMART LRR_sd22_2 256 282 - -
Spst3g02475 672 SMART LRR_sd22_2 402 419 - -
Spst3g02475 672 SUPERFAMILY L domain-like 87 250 - -
Spst3g02475 672 SUPERFAMILY L domain-like 442 670 - -
Spst3g02475 672 Pfam Leucine rich repeat N-terminal domain 61 96 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02475 Spst-Chr3 72434469 72436487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02475 32 672 Receptor kinase-like Gene Family AT4G08850 32.511 5.50e-89 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02475 - - pvu:PHAVU_003G071800g 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02475 3 72434469 72436487 Spst2g01514 2 13882714 13884645 PCT