Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01514 ATGGGCTATCAGTTGCTACAGATAGTTACAATGCTGACAGTGATAGCATTTGGAGGAGCATTAAGGAAAGCAACTGGAGAATGCAGTTCAGATGACTTGGAAGGTTTGATGGCCTTCAAGAATGGCATTCAGATGGATACTTCTGGCCGGTTGGCTAAGTGGGTTGGTATGAGCTGCTGTGAATGGGAAGGTGTTGTCTGCGACAATGCAACCACTAGAGTGACTCGGATCCTTCTCCCAGGGCTAAATGAAAAAGATTTGGGTCAAACACAGATGGTGGGCCAACTTTCTCCTTCCATAACACTCCTCTCTTCTCTTGAAATCCTTGATCTTGGTGGCTTAGTAGGCCTCAGTGGAGCAATTCCACAAACAATTGGCTTGCAAATGCCAAAGCTCAAAAAGCTTTATCTTTATGGCAACAATTTAACTGGCCCAGTACCAGAAAGCATTGGTGATTTGCCAAACCTCCAGGAACTGGGACTGCACGAAAATAGAATATATGGGTCAATCCCTTCTAGCCTCGGAAGCTTAAGAAACCTCAAAAGGCTGCTGCTTTACTCAAACCAAATTTCAGGTACAATACCCTTCTCACTTGGGAGTTTGACCAATTTGGTAGAATTGGATGTTCATGACAATGCTCTTATGGGTCATATACCCAACAGCATTGGTCAGATGCTGGCTTTGGAGAAGCTTGATCTTTCAAGCAATATGCTAAGTGGAAGCATACCTTCTTCAATAACCAATTTAACTGCCATTTCAGTTTTGTATTTTGACACCAACTATCTTGAGGGATCCATCCCATTTCCCTCAAAACCTGGTGAAATGCCTTCTCTTGGCTTCATAAGACTCCAGAATAACCACCTGAGTGGAAATATACCTCCCAGTTTTGGTTATCTTGTTTCTCTTCAAAGAGTTTCATTATCAAACAACAAACTTGAAGGAGCATTGCCTTCTAGTTTGGGCAATTTGCATTCTTTGACAGAGCTTTACCTCAGTAGCAACTCCTTCTCAGGCCAAATACCAAAATCAATAGGCCAACTCTCTCAGCTCATAATGTTGAACATTTCCAATAATTTGATTGAATGGCCATTGCCTCAGGAGATGTCTTCCCTTCAAAACCTTCAGACACTTGATCTATCTTTCAACCCTTTGAACCTATCCTCCATTCCACCATGGCTAACAAGTCTCTCATCTCTTTCCCGCATTTACCTCGCAGGCTGTGGCCTCAAGGGCCAGCTTCCAGACTTATTGCAAACAACACAGAGTCCAATACTGGAACTGGACTTATCTGAGAACCTTCTTAGCGGACCAATACCATCATGGATAGGATCCCTCAGTCAGCTCTACTTGTTAAACCTCTCAAGTAATTCACTTGATTCACACATACCTGATTCCCTCACAAACTTGCCTGATCTAGGTGTTCTTGATCTTCACTCAAATAAGTTAACAGGCTCCATAACTGGGGTATTTAACGCTGAGCTAGAAGGTACTTTTGGGGGGTCATTATCATACATTGATCTTTCTGACAACAACTTTTCAAGTGGAGTTGAGGCAATTGGTGTGGGAGAGCAGTTAAACATTCACTACCTGAATTTGTCTCATAACCTTCTGAAGGGTACATTACCAGGTTCCCTTGGGAAGCTCAACTCAATTCACAGTTTGGATTTGAGCTTCAATGAATTAGGCTCCAACTTGCCAGAAGTGCTGGCAAAGTTGACCTTGTTGGAGAGTCTGAAGCTGCAAAGCAACCACTTCAGTGGTAACATACCCAATGGATTTCTCAAGCTGAGAAAGCTGAAGGAATTGGACTTATCAGATAATGTACTTGAAGGGGAAATTCCAGAGGGTAAACCTCTTATTGACTTTCCTGGGAGTACTTATTCTGGAAATAAAGGTTTGTGTGGAAAGCCTCTTAATCCTTGTAAACGTTGA 1932 0.426 MGYQLLQIVTMLTVIAFGGALRKATGECSSDDLEGLMAFKNGIQMDTSGRLAKWVGMSCCEWEGVVCDNATTRVTRILLPGLNEKDLGQTQMVGQLSPSITLLSSLEILDLGGLVGLSGAIPQTIGLQMPKLKKLYLYGNNLTGPVPESIGDLPNLQELGLHENRIYGSIPSSLGSLRNLKRLLLYSNQISGTIPFSLGSLTNLVELDVHDNALMGHIPNSIGQMLALEKLDLSSNMLSGSIPSSITNLTAISVLYFDTNYLEGSIPFPSKPGEMPSLGFIRLQNNHLSGNIPPSFGYLVSLQRVSLSNNKLEGALPSSLGNLHSLTELYLSSNSFSGQIPKSIGQLSQLIMLNISNNLIEWPLPQEMSSLQNLQTLDLSFNPLNLSSIPPWLTSLSSLSRIYLAGCGLKGQLPDLLQTTQSPILELDLSENLLSGPIPSWIGSLSQLYLLNLSSNSLDSHIPDSLTNLPDLGVLDLHSNKLTGSITGVFNAELEGTFGGSLSYIDLSDNNFSSGVEAIGVGEQLNIHYLNLSHNLLKGTLPGSLGKLNSIHSLDLSFNELGSNLPEVLAKLTLLESLKLQSNHFSGNIPNGFLKLRKLKELDLSDNVLEGEIPEGKPLIDFPGSTYSGNKGLCGKPLNPCKR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01514 643 PRINTS Leucine-rich repeat signature 228 241 - -
Spst2g01514 643 PRINTS Leucine-rich repeat signature 371 384 - -
Spst2g01514 643 SUPERFAMILY L domain-like 275 614 - -
Spst2g01514 643 Pfam Leucine rich repeat 121 166 IPR001611 GO:0005515
Spst2g01514 643 Pfam Leucine rich repeat 426 482 IPR001611 GO:0005515
Spst2g01514 643 Pfam Leucine rich repeat 281 335 IPR001611 GO:0005515
Spst2g01514 643 ProSiteProfiles Leucine-rich repeat profile. 373 397 IPR001611 GO:0005515
Spst2g01514 643 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 363 643 - -
Spst2g01514 643 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Spst2g01514 643 Gene3D Ribonuclease Inhibitor 368 643 IPR032675 -
Spst2g01514 643 Pfam Leucine Rich Repeat 228 249 IPR001611 GO:0005515
Spst2g01514 643 Pfam Leucine Rich Repeat 373 392 IPR001611 GO:0005515
Spst2g01514 643 FunFam Leucine-rich repeat receptor protein kinase EMS1 269 361 - -
Spst2g01514 643 FunFam Leucine-rich repeat receptor protein kinase EMS1 196 268 - -
Spst2g01514 643 SMART LRR_sd22_2 323 349 - -
Spst2g01514 643 SMART LRR_sd22_2 177 209 - -
Spst2g01514 643 SMART LRR_sd22_2 225 251 - -
Spst2g01514 643 SMART LRR_sd22_2 129 155 - -
Spst2g01514 643 SMART LRR_sd22_2 596 619 - -
Spst2g01514 643 SMART LRR_sd22_2 371 388 - -
Spst2g01514 643 SMART LRR_sd22_2 548 567 - -
Spst2g01514 643 Gene3D Ribonuclease Inhibitor 270 367 IPR032675 -
Spst2g01514 643 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Spst2g01514 643 Gene3D Ribonuclease Inhibitor 190 269 IPR032675 -
Spst2g01514 643 SMART LRR_typ_2 299 322 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 323 347 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 129 152 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 596 618 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 153 177 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 445 468 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 572 595 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 548 571 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 371 396 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 201 225 IPR003591 -
Spst2g01514 643 SMART LRR_typ_2 469 492 IPR003591 -
Spst2g01514 643 SUPERFAMILY L domain-like 55 382 - -
Spst2g01514 643 PANTHER UNNAMED PRODUCT 82 514 - -
Spst2g01514 643 FunFam Nuclear pore complex protein NUP107 29 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01514 Spst-Chr2 13882714 13884645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01514 6 641 Receptor kinase-like Gene Family AT4G08850 32.799 3.13e-89 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01514 - - gmx:100799647 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01514 2 13882714 13884645 Spst2g01514 2 13882714 13884645 ECH
Spst3g02475 3 72434469 72436487 Spst2g01514 2 13882714 13884645 PCT