Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01844 ATGCAAGCGAGTGAGAGGATGAAGAACCGATGGTCCGTGTGGCTATTGACGACATTGGGCATAATCGGAGCCACGCTCTTTATCGCCAGTTTGATCCAAACCTCGGAGAACAATCTTCTATGCTCCATAACCAAATCGCAGTTTGGCCGAAGTCCCACATCGTTGCAGCTGAGAGCGATACTTCACTACGCTACCTCGCAGATCGTTCCGCAGCAGTCTCTTTCGGAGATCAGCGTCACGTTCGACGTGCTCCAGGCCCTTCATCGGCCCGCTAACTTCCTCGTGTTTGGGCTTGGCCACGACTCCCTCATGTGGGCCAGCCTCAACGCAGGCGGCACCACGATCTTCCTCGAGGAGGATCCTAAGTGGGTCCAGACCGTCCTCAAGGACGCGCCAAACCTCCGGGCGCACACCGTCCAATACCGGACCCAGCTCCGCGAAGCCGACCAGCTCCTCTCGTCCTACCGCTCCGAGCCCGCCTGCTCGCCGGCCACCGCCACGCTGCGCGGCAACGACCGCTGCAAGCTGGCGCTCCACAACCTCCCGAACGAGGTGTACTCGACGGAGTGGGACCTGATCATGATCGACGCGCCTAAGGGGTACTTCGCAGAGGCGCCGGGGCGCATGGCGGCGATCTTCTCAGCGGCGGTGATGGCGAGGGACAGGAAGAGCTCCGGCGTGACGCACGTGTTCCTGCACGATGTGGATCGGAAGGTTGAGAAGGCTTACGCGGAGGAGTTTCTCTGCCGGAAGCAGTTGGTGAAAGGTGTCGGCAGACTCTGGCATTTCGAGATTCCTCCCAGGACGAATCTCTCTCGTCATGACGACCATTTCTGTTAG 840 0.5988 MQASERMKNRWSVWLLTTLGIIGATLFIASLIQTSENNLLCSITKSQFGRSPTSLQLRAILHYATSQIVPQQSLSEISVTFDVLQALHRPANFLVFGLGHDSLMWASLNAGGTTIFLEEDPKWVQTVLKDAPNLRAHTVQYRTQLREADQLLSSYRSEPACSPATATLRGNDRCKLALHNLPNEVYSTEWDLIMIDAPKGYFAEAPGRMAAIFSAAVMARDRKSSGVTHVFLHDVDRKVEKAYAEEFLCRKQLVKGVGRLWHFEIPPRTNLSRHDDHFC 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01844 279 NCBIfam TIGR01627 domain 58 279 IPR006514 GO:0045492
Spst3g01844 279 Gene3D Vaccinia Virus protein VP39 71 275 IPR029063 -
Spst3g01844 279 Pfam Polysaccharide biosynthesis 76 263 - -
Spst3g01844 279 PANTHER OS11G0490100 PROTEIN 9 279 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01844 Spst-Chr3 33084451 33085290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01844 - - pvu:PHAVU_002G173400g 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01844 3 33084451 33085290 Spst3g01844 3 33084451 33085290 ECH
Spst1g01884 1 27005443 27006291 Spst3g01844 3 33084451 33085290 PCT