LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g01884	ATGAGGAACCGTAATCCGTTACTGGAGAGACGGTGGTTTGTGGGCCTGGCGGCGGTGGGCCTGATCGTCACGGGGCTTTTCCTCACAAGCTCGATCCGATCCCCGGAAACCTCGTATCTGTGTCCGGCCGCGCTCGGGATCCGAACCCGAACCGAATTCAGTTACGAACCGGCACCGATGCAGATGCGCGCGATTCTCCATTACGCGACGTCGCGCGTGGTGCCGCAACAATCGGTGGCGGAGATCAAGATCAGTCTGGACGTGATAAAGTCACTGGGCCGGCCCTGCAACTTCCTGGTGTTCGGGCTGGGCCACGACTCCCTCATGTGGGCGTCGTTCAACCCGGGAGGCAGGACGGTGTTCCTGGAGGAGGACCCTAAGTGGGTCCACTCGATCTTGAAAGACGCGCCGGGCCTGAAGGCCCACACGGTCCGTTACCGCACGCAGCTTCGCGAAGCCAAAACGCTGCTCACCTCGTACCGCTCCGAAGCCGCGTGTTCTCCTGCGAGAGCGTACCTGCGAGGCAACGAAGCGTGCAAGCTGGCGCTGGAGAATCTCCCCGACGAGGTTTACGAGACGGAGTGGGACATGATCATGATCGACGCGCCCAAGGGGTACTACGCGGAGGCGCCGGGGAGGATGTCGGCGGTGTTCTCAGCCGCGGTGATGGCACGCAACCGGAAGCAACTCGGTGTGACGCACGTGTTCTTGCATGACGTGGATCGCAAGGTGGAGAAGGTGTACGCTGAAGAGTTTCTGTGTAAGAAGAACTTTGTGAACGGTGCTGGAAGGCTTTGGCACTTCAAGATACCTCCTTCTAACGACACACTTGCTTCGCATTTCTGCTAG	849	0.5995	MRNRNPLLERRWFVGLAAVGLIVTGLFLTSSIRSPETSYLCPAALGIRTRTEFSYEPAPMQMRAILHYATSRVVPQQSVAEIKISLDVIKSLGRPCNFLVFGLGHDSLMWASFNPGGRTVFLEEDPKWVHSILKDAPGLKAHTVRYRTQLREAKTLLTSYRSEAACSPARAYLRGNEACKLALENLPDEVYETEWDMIMIDAPKGYYAEAPGRMSAVFSAAVMARNRKQLGVTHVFLHDVDRKVEKVYAEEFLCKKNFVNGAGRLWHFKIPPSNDTLASHFC	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g01884	282	Gene3D	Vaccinia Virus protein VP39	70	280	IPR029063	-
	Spst1g01884	282	NCBIfam	TIGR01627 domain	63	282	IPR006514	GO:0045492
	Spst1g01884	282	PANTHER	OS11G0490100 PROTEIN	26	282	IPR006514	GO:0045492
	Spst1g01884	282	Pfam	Polysaccharide biosynthesis	80	268	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g01884	Spst-Chr1	27005443	27006291	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g01884	-		-	gmx:100791951	496.508

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst1g01884	1	27005443	27006291	Spst3g01844	3	33084451	33085290	PCT