Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01514 ATGGCAATGGTGCCTCGGAAGATGCAATCCAGGGCTACCCGCCATATTTTTTCAGCATCAGATGACACTACAATGACTAAACAAGTTCGTGCGACCCATGCTCCGGATGATCGAGACATTGAAGTTAGACCTCTTCTAAATGTTGTTGAAGACATATTTCACCGTGTTGCCTCTCTCATCCCTGACATTGTTCAGGGAAAACCAATGCAAATGGGTGTCAAGAAGGACAGTACCCACCAATCTGATCTGGCTGAGGTGCTAGATATTTCATACCACACAATCAACAAAATTTCCTGCGAGATATGTTGCAAGTGTTCGAGTGGTGATGTACATGCCACGGCCATGGGAATACTGGGCATGCTCTCGTGCTATTCATGGGATGCCAAGGTGGTGATAGCGTTGGCAGCATTTGCAGCCAACTTTGGGGAGTTTTGGCTGGTGGCTCAACTTTATGCCACCAACCGTCTGGCTAAGTCTGTTGCAAAGTTGAAGCACATCCATGAAACACTGGAACAAGTAGATGAGTTGGGACCCAAGTTCGAAATGATCAATAACATTTTAAAGGCAATGTTGGATGTAACCGATTACATTGTTCAATTCCACGAGCTTCCTTCTCGGTACATTGACCCCGAGGCACCGGAGATGTTGACTGCCTCAAATCTTATCCCCGGTGCTGTCTATTGGACCATCCGCAGTATTGTGTCCTGTGCATCACATATTTTAGGCATAACAGGCTTGGGTCAAGGATACATGACAACAACAACAGAGGCTTGGGAGCTTTCCAGTTTGACCCATAAGCTTGATAACTTAAATGGTCACCTTCGCAAGCAACTTACCCTTTGTCATCTTCATTTAGATGACAACAAACAGAGAGAAGTATTTGAAACAATTCGGGTCCTTTTTGAGACATCCCACCAAGATAATTTGAAGGCCCTCAAAGCTATGTTTTGCAGCAAGGATGATCCGTTGCCATTGTTTGATGGTTCTTCCAAACAAAGGGTTAGCATTGAGGTATTGAGAAGGAAAATTGTGCTATTCTACATATCAGACCTACATAATGTCTCTGATCAAGAGCTTGTGATTTTTGAACAAATGTACCTAGAGTCACGTCAGGATTCAACCAGGTTAGAGAGTCAATATGAACTCGTTTGGATTCCAGTTGTGGACAAGGCGTTGCCATGGACTGAATTGAAACCAAAGTTTGAGATGCTGCAATCAATGATGTCATGGTACTCAGTTTATGATCCTTATCTTCTGGAGCCGGCAACCTTCAAGTACATAAAAGAGGTTTGGCTTTTCAAAGCGAAGCCTATACTTGTTGTGTTGGATCCCCTAGGGAAGGTTGTGAATCTGAATGCAATACCCATGATGTGGATTTGGGGAAGCTTGGCCTATCCTTTTTCTACCTCAAGGGAGGAAGTATTGTGGAATCAGGAAACATGGGGACTTTCACTATTGGCAGATACAATTGATCCATCGCTTTTGTTTTGGATATCAGAAGGCAAATATATATGCTTGTACGGAGGGGACGATATGGACTGGATCCGTAAATTCACAAGCACTGCATATTCACTGGCAAGTGCTCTGCAACTACCACTAGAGATGATTTATGTGGGGAAAAGCAATCCAGGGAAGAAAGTTCAAGAAATCAACAACGCCATTCAAGCAGAAAAATTGAGTAGCGTGCTTCCTGACCTTGTCATATTTTGGTTTTTCTGGGTTAGGCTAGAGAGTATGTGGCACTCCAAATCACAGCATAGCAAAACAGTCGAGAACGACCACATAATGCATGAAGTAATGAGAATCCTAACATATGATAGTGGTGACACAGGCTGGGCCATAATTAGTCAAGGCACAGGAAGGATGGCACAGGGTAAGGGAGATGCATTTCTAAGGTGCCTGAATGAACACGAGAATTGGAAGGACACAGCAAAAGTTAAAGGAATCTTGGCAGCAATGGGTGACTATATACAAGGACTCCAAATCCCTCACCACTGCAACCGTTTGATACTTCCAGGAATCAGTGAAGGGGTCCCAGACAAAGTGGTCTGCGCTGAATGTGGCCGAACAATGGAGAAGTTCTACATGTATCGCTGCTGTAACGAGTAA 2109 0.44 MAMVPRKMQSRATRHIFSASDDTTMTKQVRATHAPDDRDIEVRPLLNVVEDIFHRVASLIPDIVQGKPMQMGVKKDSTHQSDLAEVLDISYHTINKISCEICCKCSSGDVHATAMGILGMLSCYSWDAKVVIALAAFAANFGEFWLVAQLYATNRLAKSVAKLKHIHETLEQVDELGPKFEMINNILKAMLDVTDYIVQFHELPSRYIDPEAPEMLTASNLIPGAVYWTIRSIVSCASHILGITGLGQGYMTTTTEAWELSSLTHKLDNLNGHLRKQLTLCHLHLDDNKQREVFETIRVLFETSHQDNLKALKAMFCSKDDPLPLFDGSSKQRVSIEVLRRKIVLFYISDLHNVSDQELVIFEQMYLESRQDSTRLESQYELVWIPVVDKALPWTELKPKFEMLQSMMSWYSVYDPYLLEPATFKYIKEVWLFKAKPILVVLDPLGKVVNLNAIPMMWIWGSLAYPFSTSREEVLWNQETWGLSLLADTIDPSLLFWISEGKYICLYGGDDMDWIRKFTSTAYSLASALQLPLEMIYVGKSNPGKKVQEINNAIQAEKLSSVLPDLVIFWFFWVRLESMWHSKSQHSKTVENDHIMHEVMRILTYDSGDTGWAIISQGTGRMAQGKGDAFLRCLNEHENWKDTAKVKGILAAMGDYIQGLQIPHHCNRLILPGISEGVPDKVVCAECGRTMEKFYMYRCCNE 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01514 702 Pfam Sieve element occlusion N-terminus 20 305 IPR027942 -
Spst3g01514 702 Pfam Sieve element occlusion C-terminus 470 701 IPR027944 -
Spst3g01514 702 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 8 701 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01514 Spst-Chr3 18569762 18573286 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01514 - - gmx:100799626 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01514 3 18569762 18573286 Spst3g01514 3 18569762 18573286 ECH
Spst3g01514 3 18569762 18573286 Spst1g01946 1 27652351 27655526 PCT