Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01503 ATGGCATCATTGGTGGGAACATTGTTTGGTGGAACAGATGTGCAGGCAATGATGAAGTGCTTCTCTCTGCGCTTAGTCTCCTTTTGGGCTCTCCTTGCTCTCTGTTTTGTAAGTGTGTCTTCTCAAAATATATCCAAGAGTAGCGGACAGCGAGATACCCTCCCCCCAAGAGGTTGGAATTCTTATGATTCCTTTTGCTGGACAATTTCTGAAGAAGAATTCTTACAGAGTGCTGAAATAGTTTCTCAACGTCTCAAGGCTCATGGATATGAGTTTGTCGTGGTGGATTACCTCTGGTATAGGAGGAAAGTCAAGGGTGCTTATCCTGATTCTCTTGGATTTGACGTGATTGATGAATGGGGAAGGATGCTCCCAGACCCAGGAAGGTGGCCTTCTTCCATAGGTGGGAAGGGATTCAGTGAAGTAGCTAATAAAGTACATAGTTTGGGTTTGAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACCCAAGCTGTCAATGCAAACACCCCTATCCTAGATACAACAAAGGGAGGTGCATATCAAGAATCAGGTCGAGTGTGGCATGCAAAAGACATAGCAATCCCAGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACGAAGTTGGGAGCAGGAAGAGCTTTTTTAAAATCCCTGTATCAGCAGTATGCCGCATGGGGTGTTGATCTAGTGAAACATGACTGTGTGTTTGGCGATGACTTGGAATTAAATGAAATAAGCTATGTGTCAGAGGTTCTCCGTGAGCTTAATCGCCCTATTGTGTATTCTCTGTCTCCTGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTAGTCAACATGTATAGAATAACAGGAGATGACTGGGATAATTGGGGGGATGTCAAGGCTCATTTTGACGTCACAAGGGATTTTTCTACAGCTAATATGATAGGAGGAAAAGGTTTAAAGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGTTCAAATGAAGGTCCACATAGGTTTACTAAGCTCAATCTCGAAGAAAAAAGGACACAGATGACTTTGTGGTCTTTGGCGAAGTCTCCTCTTATGTATGGGGGAGATGTGCGGAAGATCGATACTATCACATACGAACTTATCACAAATCCTACCCTGCTAGAGATAAATTTCTTCAGCTCAAATAATATGGAGTTTCCTTATATCACAAGTTCAAATAACTTGAAGCACCCTGGAGGGAAAAAAGGAAGACCTAAGCAAGGAACAAAGGCATTATATACACATTCATTAGCTTTGACTGGCTGCGGCGAATCAAAGGCGAGTGGTTGGTCTATTGAAAGTTCTAACCAATACCTTGAAAGAATCTGCTGGAAAAAGAGTGTAGAAAACCAGCATCAAGCCCCTTTCTGCGTAAACAAGAGAGAACTTCAACTCAGATTAGATGGTGAGAATATGTATCAAGAGGACTATCGAGGGAAACATCAACTAGTTGCTGCTGACAGAATGAGATTTTGCTTGGACGCTTCTCCAAAGCGAAAGGTTACTTCTAAAGAGTTCAAGAGAGGAACATTTTCTCCATGCAGATGGGATTCAAATCAGATCTGGGAACTGAACTCCAATGGGACTATGGTCAATAGTTACTCCGGTCTTTGTGCAACAGTAAAATTTGTTGAAGATAAAGGTAATATTGGTGGGATTCGCTCTTGGATTGCAACAGGAAGAAAAGGGGAAATCTATCTAGCTTTCTTCAATCTAAGCGATCAGAAGACAGATATATATGCAAAGACATCATATCTGGCCAAGGTTCTTCCTGACAGAAAGATCGATTCATGCAAGGGAACGGAAGTGTGGAGTGGAACGGATGTAATTACAACGCAGGGGATGATATCAATGAACGTGGATATTCATGGATGTGCACTATTTGTTCTAAATTGCAACTAG 1971 0.4257 MASLVGTLFGGTDVQAMMKCFSLRLVSFWALLALCFVSVSSQNISKSSGQRDTLPPRGWNSYDSFCWTISEEEFLQSAEIVSQRLKAHGYEFVVVDYLWYRRKVKGAYPDSLGFDVIDEWGRMLPDPGRWPSSIGGKGFSEVANKVHSLGLKFGIHVMRGISTQAVNANTPILDTTKGGAYQESGRVWHAKDIAIPERACAWMPHGFMSVNTKLGAGRAFLKSLYQQYAAWGVDLVKHDCVFGDDLELNEISYVSEVLRELNRPIVYSLSPGTSVTPAMAKDVSGLVNMYRITGDDWDNWGDVKAHFDVTRDFSTANMIGGKGLKGNSWPDLDMLPFGWLTDPGSNEGPHRFTKLNLEEKRTQMTLWSLAKSPLMYGGDVRKIDTITYELITNPTLLEINFFSSNNMEFPYITSSNNLKHPGGKKGRPKQGTKALYTHSLALTGCGESKASGWSIESSNQYLERICWKKSVENQHQAPFCVNKRELQLRLDGENMYQEDYRGKHQLVAADRMRFCLDASPKRKVTSKEFKRGTFSPCRWDSNQIWELNSNGTMVNSYSGLCATVKFVEDKGNIGGIRSWIATGRKGEIYLAFFNLSDQKTDIYAKTSYLAKVLPDRKIDSCKGTEVWSGTDVITTQGMISMNVDIHGCALFVLNCN 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01503 656 SUPERFAMILY (Trans)glycosidases 51 400 IPR017853 -
Spst3g01503 656 Pfam Alpha galactosidase C-terminal beta sandwich domain 575 653 IPR041233 -
Spst3g01503 656 SUPERFAMILY Ricin B-like lectins 499 568 IPR035992 -
Spst3g01503 656 Gene3D Aldolase class I 48 402 IPR013785 -
Spst3g01503 656 Pfam Alpha galactosidase A 225 400 IPR002241 GO:0004553|GO:0005975
Spst3g01503 656 SUPERFAMILY Glycosyl hydrolase domain 574 654 - -
Spst3g01503 656 CDD GH27 55 400 IPR002241 GO:0004553|GO:0005975
Spst3g01503 656 PRINTS Glycosyl hydrolase family 27 signature 49 68 IPR002241 GO:0004553|GO:0005975
Spst3g01503 656 PRINTS Glycosyl hydrolase family 27 signature 143 164 IPR002241 GO:0004553|GO:0005975
Spst3g01503 656 PRINTS Glycosyl hydrolase family 27 signature 358 379 IPR002241 GO:0004553|GO:0005975
Spst3g01503 656 Gene3D - 571 655 IPR013780 -
Spst3g01503 656 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 29 655 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01503 Spst-Chr3 18479005 18484757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01503 16 488 Glycoside Hydrolase AT3G26380 65.053 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01503 - - gmx:100783705 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01503 3 18479005 18484757 Spst3g01503 3 18479005 18484757 ECH
Spst3g01503 3 18479005 18484757 Spst1g01951 1 27698058 27711374 PCT