Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01951 ATGGCGGAGCTCCGCCACTCCTCTTCTCTCGGCAGCCGAGCCACCAATTCTCCGATGAAGCGTGACGCCGTCGTCGGCGTCGGCGGCGGCGATGCCTCCCCTCTCATTCCCGACAGCCATCTTGCCGCCGACGATGAGCACGATCGCCACTCGTCTAAGGACCGCGAACGGCACGTCTGCTCCTTCTTCAACGACGACCCTAGGGTTTCACCTCACAACTCCAGGATCTCTGTGTTCTTCACCTTCCTTCTTCTCCTCGTTGGTTTAGTCTCCGTGTTCACAATTTTCCATAAACTCAATGCCCCTTACTTGTGTAAAAAGGACGGGATTGTTCTTCATTGCCCACATGTTAAGGAATCGCCATCTCTCTGGGAAAATCCTTTCTCATCGACAACATCTTGGAAGCCCTGTGCTGAGCGCCGGGATGGTGTTTTATCAGATCTTCCTCCTGAAAATGAAACAAATGGCTATATATTCATCCATGCTGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTGGCCAAAATAATGAATGCCACTCTTATCTTGCCTGTTTTGAAGCAGGATCAGATTTGGAAAGATCAAACTAAATTTGAAGACATTTTCGATGTGGATCACTTCATTGACTATCTGAAGTATGATGTTCGTATTGTACGAGATATCCCAAAATGGTTTACTGATAAATCAGAGCTATTTTCTAGCATAAGACGGACTGTAAAAAACATTCCAAAATATGCACCTGCACAGTTTTACATCGATAATGTTCTGCCCCGAATCAAGGAGAAGAAGATTATGGCTCTTAAACCGTTTGTTGACAGGCTGGGATATGACAATGTTCCTCCGGAAATCAACAAGCTGAGATGTAGAGTTAATTATCATGCGCTCAAATTTCTTCCTGCTATAGAGCAGATGGCTGATTCACTAGCATCAAGAATGAGAAACCGAACTGGCAGTTCAAACCCTTATATGGCTCTGCATCTACGATTTGAGAAAGGAATGGTGGGACTGTCATTCTGTGATTTTGTGGGGACAAGAGAGGAGAAAGTCAAAATGGCAGAGTATAGAAAAAAGGAGTGGCCTCGACGGTACAAGAATGGTTCCCATCTTTGGCAATTAGCTCTGCAGAAGCGCAAGGAAGGACGATGTCCTCTAGAGCCTGGAGAAGTGGCTGTTATTCTTCGGGCTATGGGCTATCCAAAGGAAACTCAAATTTATGTAGCTTCTGGACAGGTGTATGGTGGACAAAACCGGATGGCTCCCCTAAGGAATATGTTCCCTAATCTGGTTACCAAGGAGGAGCTAGCAACCAAAGAGGAGTTAGATGGTTTCAGAAAGCATGTGACAAGCCTTGCAGCTCTTGACTTCTTAGTGTGCTTGAAGTCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGCTGATTATCGGGGCTCGTAGATACATGGGCCACCGTCTAAAGTCAATTAAGCCTGACAAAGGGCTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTACTTTTGTAGAAGATGTTGTTGTTACTCACCAGACACGGACGGGATTGCCAGAAGAGACTTTCCCTAACTATGACCTCTGGGAGAACCCTCTGACCCCATGCATCAAGGAATCTGTTGGTACCGCCCGCAAATATGATGTCCCCACAACGAGGCTGTCCTTGAAACCAGTCAGCACTTTAGCAGATTTCGTGTTTCACTTGCACGTTTCCTCTCGGAATCCTCCCCACATTGGAAGATGTGTGTGGTCTCAAAATGTATCCGAGAGTGACCGACAGCAAGCTAACATTCCACCAAGAGGTTGGAACTCCTATGATTCCTTTAGCTGGACAATATCTGAAGAAGAATTCTTACAGAGTGCTGAAATAGTTTCTCAGCGTCTCCATGATCATGGATATGAGTATGTTGTGGTGGATTATCTCTGGTATAGAAGAAAAGTTCAGGGTGCTTATCATGATTCCCTTGGATTTGATGTGATTGATGAATGGGGAAGGATGCTTCCTGATCCAGGAAGGTGGCCTTCTTCTGAAAAGGGGAAAGGATTTGCTGAAGTGGCTAATCAAGTTCATAGCTTGGGTTTAAAATTTGGGATTCATGTCATGAGAGGAATAAGCACACAAGCTGTCAACGCAAACACCCCTATCCTTGATACAACAACGGGAGGTGCTTATCAAGAATCTGGCCGTGTGTGGTATGCAAAAGACATAGCAATCCGAGAAAGGGCCTGTGCATGGATGCCTCATGGTTTCATGAGTGTGAATACAAAGTTGGGAGCTGGGAAAGCCTTTTTGAAATCCCTTTATGAGCAGTATGCTTCATGGGATGTTGATTTTGTGAAACATGACTGTGTATTTGGGGATGACTTTGATTTAAATGAAATAAGCTATGTGTCTGAGGTTCTCAAGGAGTTTGATCGTCCCATTGTATATTCTTTGTCTCCTGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTGGTCAATATGTATCGTATAACAGGAGATGACTGGGATACATGGCAGGATGTCAAAGCACATTTTGATATTGCAAGGGGTTTTGCAAATGCTAATATGATAGGAGCAAAAGGTTTAATGGGGAAATCCTGGCCTGATTTGGACATGCTACCCTTTGGATGGCTAACAGATCCTGGTTCAAATGAAGGTCCACATAGGTTTAGTTCCCTCAATCTGGAAGAAAAGAAGACACAGATGACTCTGTGGTCCATGTCTAAGTCTCCCCTTATGTATGGTGGAGATGTTCGGAAGATTGATCCTAGCACATATGACATCATCACAAATCCTACCCTTTTGGAGATTAATTCTTTTAGCTCAAATAATATGGAGTTTTCTTACATCATAAGTGTTAAGAGTGAAGATCAGGATTTTGGTATGAGAAGAAGCAGCAAAGAAATAAAGACAACTACCACTCATTCGTTAAGACTCACAAGCTGCACCGAGTCAAAGGCAAGGGGTTGGGCTAGTGAAAGTCTTAACCAATATCTTGAAAGAATATGTTGGAAAAGGAGTTTAGGAAACAAGCATCTTCCCCCCTTCTGTGTGCACAAAAGAGAACTTTACTTCCCACTCCTATTAGATGAAGTGAGTATGTATCAAGAGTATCATCAAGGGAAATACCATTTAGTTGCAAGCAACAAAATAAAGTTTTGCTTGGATGCTTCTCCAAAACACAAGCTCACTTCTAAAGAGTTCAAGAGAGGGACATTTTCTCCCTGCAGGTGGGATTCAAATCAGATGTGGGAATTGAACCCTAATGGGACCCTGGTGAATAGTTATTCTGGCTTGTGTGCAATAATAGAGTCTCGGGAAGATATCATTAATTCTGGTGGCTTGCACTCTTGGATTGCTGTCGGAAGAAAAGGAGAAGTCTATATTGCTTTCTTCAATCTAAGTGAACAGAAGATGGTAATATCTGCACAAGTATCTAATCTGGCTAAGTCACTTCCTGGCAGAGACTTCAGTTCTTGTGAGGGCAGTGAAGTGTGGAGTGGAGATGCTGTACAAATAACTGAAGGGACGTTCTCAACAGCGGTGGAAATGCATGGAAGTGCTCTAATTGTTCTAAATTGCAGCTAG 3645 0.4403 MAELRHSSSLGSRATNSPMKRDAVVGVGGGDASPLIPDSHLAADDEHDRHSSKDRERHVCSFFNDDPRVSPHNSRISVFFTFLLLLVGLVSVFTIFHKLNAPYLCKKDGIVLHCPHVKESPSLWENPFSSTTSWKPCAERRDGVLSDLPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPKWFTDKSELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPAIEQMADSLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKVKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCIKESVGTARKYDVPTTRLSLKPVSTLADFVFHLHVSSRNPPHIGRCVWSQNVSESDRQQANIPPRGWNSYDSFSWTISEEEFLQSAEIVSQRLHDHGYEYVVVDYLWYRRKVQGAYHDSLGFDVIDEWGRMLPDPGRWPSSEKGKGFAEVANQVHSLGLKFGIHVMRGISTQAVNANTPILDTTTGGAYQESGRVWYAKDIAIRERACAWMPHGFMSVNTKLGAGKAFLKSLYEQYASWDVDFVKHDCVFGDDFDLNEISYVSEVLKEFDRPIVYSLSPGTSVTPAMAKDVSGLVNMYRITGDDWDTWQDVKAHFDIARGFANANMIGAKGLMGKSWPDLDMLPFGWLTDPGSNEGPHRFSSLNLEEKKTQMTLWSMSKSPLMYGGDVRKIDPSTYDIITNPTLLEINSFSSNNMEFSYIISVKSEDQDFGMRRSSKEIKTTTTHSLRLTSCTESKARGWASESLNQYLERICWKRSLGNKHLPPFCVHKRELYFPLLLDEVSMYQEYHQGKYHLVASNKIKFCLDASPKHKLTSKEFKRGTFSPCRWDSNQMWELNPNGTLVNSYSGLCAIIESREDIINSGGLHSWIAVGRKGEVYIAFFNLSEQKMVISAQVSNLAKSLPGRDFSSCEGSEVWSGDAVQITEGTFSTAVEMHGSALIVLNCS 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01951 1214 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 97 551 - -
Spst1g01951 1214 SUPERFAMILY (Trans)glycosidases 608 957 IPR017853 -
Spst1g01951 1214 Pfam GDP-fucose protein O-fucosyltransferase 157 489 IPR019378 -
Spst1g01951 1214 PRINTS Glycosyl hydrolase family 27 signature 606 625 IPR002241 GO:0004553|GO:0005975
Spst1g01951 1214 PRINTS Glycosyl hydrolase family 27 signature 700 721 IPR002241 GO:0004553|GO:0005975
Spst1g01951 1214 PRINTS Glycosyl hydrolase family 27 signature 915 936 IPR002241 GO:0004553|GO:0005975
Spst1g01951 1214 CDD GH27 612 957 IPR002241 GO:0004553|GO:0005975
Spst1g01951 1214 Gene3D - 1125 1213 IPR013780 -
Spst1g01951 1214 Gene3D - 299 496 - -
Spst1g01951 1214 Pfam Alpha galactosidase C-terminal beta sandwich domain 1132 1211 IPR041233 -
Spst1g01951 1214 MobiDBLite consensus disorder prediction 1 53 - -
Spst1g01951 1214 Gene3D Aldolase class I 593 959 IPR013785 -
Spst1g01951 1214 CDD O-FucT_plant 157 492 IPR024709 -
Spst1g01951 1214 SUPERFAMILY Ricin B-like lectins 1071 1119 IPR035992 -
Spst1g01951 1214 Pfam Alpha galactosidase A 625 720 IPR002241 GO:0004553|GO:0005975
Spst1g01951 1214 Pfam Alpha galactosidase A 779 957 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01951 Spst-Chr1 27698058 27711374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01951 596 1041 Glycoside Hydrolase AT3G26380 67.411 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01951 - - gmx:100777954 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01503 3 18479005 18484757 Spst1g01951 1 27698058 27711374 PCT