Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01494 ATGTGGTGGATGATGGGCGAGACCGGAGGCAATTACTGTTCCAAGAAGAGCGATGATCTGTGCAGCAATGTTTGTGGGCAGGAATCAAGTCAAGTTTCAAGCATGTCAAGGATTCGCTGCATTCTGCGCGGTTTTGATGTTAAAACCTATATGTTCATGTTTGCTGTTGTCCCAATGTGCATCTTTGGATTCTATATACATGGCCAAAAGATCTCTTACTTTCTGAGGCCGCTGTGGGAAAAAGCACCTAAGCCTTTCAATGTCATTCCTCATTACTATAACGAAAATGTCACCATGGAGAATCTCTGCAGACTTCATGGTTGGGGAGTCCGGGAGTACCCTAGACGTGTTTATGATGCTGTGTTGTTTAGTAATGAGTTGGAAATACTAACTTTGCGTTGGAGAGAACTTTACCCTTACATAACTGACTTTGTTCTCCTTGAGTCAAATTCTACGTTTACCGGATTGCCTAAGCCTCTGGTTTTCCATAGCAACAGGGAACAGTTCAAATTTATCGAGTCACGTTTAACTTATGGGACCATTGGTGGGAGATTTAAGAAAGGAGAAAACCCATTTGTTGAGGAGGCATATCAGCGTGTAGCATTGGACCAGCTCCTCAGGATAGCTGGTATTACTGATGATGACTTGTTGATTATGTCTGATGTGGATGAGATACCAAGCGCTCACACTATTAATCTCCTGAGATGGTGTGATGAAGTACCTTCAATCCTTCATCTGCAGCTGAAAAACTATCTCTATTCATTTGAATTTCGCGTGGATGATAAGAGCTGGAGGGCTTCGATTCACAGGTATCAGACTGGTAAGACAAGGTATGCACATTATCGCCAATCTGATGACATGTTGGCTGATGCTGGCTGGCATTGTAGCTTTTGCTTCCGTCGAATCAGTGATTTCATTTTTAAGATGAAAGCCTACAGCCATTATGATAGAGTCAGGTTCTCTCATTACTTAAATCCTGACAGAATTCAGAAGGTAATCTGCAAAGGTGCTGATTTGTTTGATATGCTGCCGGAGGAGTACACTTTCAAGGATATCATTGGTAAAATGGGACCAATACCCCATTCCTATTCTGCAGTTCATCTTCCTGCTTTCCTTCTGGAAAATGCTGACAAGTATAAATTTCTTTTGCCTGGAAATTGCAAGAGAGAGAGATGA 1176 0.4218 MWWMMGETGGNYCSKKSDDLCSNVCGQESSQVSSMSRIRCILRGFDVKTYMFMFAVVPMCIFGFYIHGQKISYFLRPLWEKAPKPFNVIPHYYNENVTMENLCRLHGWGVREYPRRVYDAVLFSNELEILTLRWRELYPYITDFVLLESNSTFTGLPKPLVFHSNREQFKFIESRLTYGTIGGRFKKGENPFVEEAYQRVALDQLLRIAGITDDDLLIMSDVDEIPSAHTINLLRWCDEVPSILHLQLKNYLYSFEFRVDDKSWRASIHRYQTGKTRYAHYRQSDDMLADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPDRIQKVICKGADLFDMLPEEYTFKDIIGKMGPIPHSYSAVHLPAFLLENADKYKFLLPGNCKRER 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01494 391 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 34 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Spst3g01494 391 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01494 Spst-Chr3 18399262 18401213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01494 1 390 Glycosyltransferase AT1G12990 80.256 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01494 K00737 - gmx:100787062 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01494 3 18399262 18401213 Spst3g01494 3 18399262 18401213 ECH
Spst3g01494 3 18399262 18401213 Spst1g01960 1 27763098 27764862 PCT