Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01128 ATGGCGTTGCAGGAGAGGTTAGACAAGTTCAAGAAGCAGCAGGAGAAGTGCCAGACGACACTGTCAAGCATTGCAGCAAGCAAGGCCGCAGCCAGCCAAAAATCTGCCGCACATGGATCGGCCAATGGAAGAAACGCGCCCTCTGCGGTTAAGTTTTCGACCGACACGGAGAGGCTTCAGCATATTAACAGCATACGGAAAGCTCCTGTGGGTGCTCAGATGAAGCGTGTGATTGATCTCCTTCTAGAGACAAGACAAGCTTTAACACCAGAGCAGATAAACGAGGCATGCTATGTTGACATGAAGGCTAACAAAGATGTCTTTGAAAATCTAAGGAAAAACCCAAAAGTGAATTATGATGGTCAACGATTCTCTTACAAGTCAAAGTATGGTCTTAAGGACAAAACAGAACTTCTTCAACTGATACGTAAGTATCCTGAAGGTCTTGCTGTTATTGATTTAAAGGATGCTTACCCCACTGTTATGGAAGACTTGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTGTCCAACTTTGATTCACAAGAAGATATTGCCTACCCTAACGATCCCAAAGTGCATATTAAGGTGGATGATGATCTAAAACAGCTTTTCCGGAGTATTGAATTGCCTCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCCGCCACCAACACTGCAAAGAGGAGGAGTGCAGCACAAATTCAAGGCATTTCTTCCAAGCCCAAGCCTAAGAAGAAGAAGAGTGAAATCAACAAGAGAACGAAGCTGACCAATGCCCATCTTCCAGAGCTTTTTCAAAACTTAAATAATTCCTGA 840 0.4393 MALQERLDKFKKQQEKCQTTLSSIAASKAAASQKSAAHGSANGRNAPSAVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLLETRQALTPEQINEACYVDMKANKDVFENLRKNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISSKPKPKKKKSEINKRTKLTNAHLPELFQNLNNS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01128 279 MobiDBLite consensus disorder prediction 226 245 - -
Spst3g01128 279 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 277 IPR016656 GO:0005673|GO:0006367
Spst3g01128 279 MobiDBLite consensus disorder prediction 225 279 - -
Spst3g01128 279 Pfam TFA2 Winged helix domain 2 133 190 IPR040501 -
Spst3g01128 279 Pfam TFIIE beta subunit core domain 72 130 IPR003166 GO:0006367
Spst3g01128 279 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 58 133 IPR003166 GO:0006367
Spst3g01128 279 PIRSF TFIIE-beta 1 278 IPR016656 GO:0005673|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01128 Spst-Chr3 14625080 14628253 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01128 K03137 - gmx:100802433 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01128 3 14625080 14628253 Spst3g01128 3 14625080 14628253 ECH
Spst2g00324 2 2523545 2526607 Spst3g01128 3 14625080 14628253 PCT