Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00324 ATGGCGTTTCAGGAAAAGGGAAACAGGTTTAAAAGGCAGCCAGAGAAGAATTCCTCTGCTTCAAACAATGGAAGAACTCCAGGTGCTGTCAAATTCTCTAAAGATACGGAAAGGCTTCAACATGTTAATAGCATACGCAAAGCCCCCGTAGGGGCTCAGATGAAGCGTGTTATTGATCTTCTTTTTGAGACCAGAAAGGCTTTAACAATGGAGCAAATAAATGAAGCGTGTTACGTGGACATGAGAGCTAATAAAGATGTTTTCGAGAGTATGAGGAAAAACCCAAAAGTAAAATATGATGGGGAAAGATTCTCTTACAAGTCGAAGCATGATGTTAGGGATAAAAGTCAGCTGCTTTTCCTGGTACGTAAGTTTCCAGAGGGCATTGCTGTTGTTGACCTAAAAGATTCTTACCCAACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTTCAAGGGAGGTTTGGCTGTTATCCAACTTTGACTCACAAGAGGACATTGCCTACCCAAATGATCCTAAAGTACCCGTTAAGGTGGATGATGACCTAAAACAGCTTTTCCGGGGGATTGAGTTACCCCGTGATATGATTGACATAGAGAGGGATCTACAAAAAAATGGAATGAAGCCTGCTACCAACACTGCAAAGAGAAGGAGTGCAGCGCAAATGGAAGGCATTTCAACAAAGCCTAAACCTAAGAAGAAGAAGAATGAAATCACTAAGAGGACCAAGCTGACCAATGCCCATCTTCCGGAGCTTTTTCAGAATTAA 768 0.4219 MAFQEKGNRFKRQPEKNSSASNNGRTPGAVKFSKDTERLQHVNSIRKAPVGAQMKRVIDLLFETRKALTMEQINEACYVDMRANKDVFESMRKNPKVKYDGERFSYKSKHDVRDKSQLLFLVRKFPEGIAVVDLKDSYPTVMEDLQALKASREVWLLSNFDSQEDIAYPNDPKVPVKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISTKPKPKKKKNEITKRTKLTNAHLPELFQN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00324 255 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 13 254 IPR016656 GO:0005673|GO:0006367
Spst2g00324 255 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 38 113 IPR003166 GO:0006367
Spst2g00324 255 MobiDBLite consensus disorder prediction 206 220 - -
Spst2g00324 255 Pfam TFA2 Winged helix domain 2 113 170 IPR040501 -
Spst2g00324 255 Pfam TFIIE beta subunit core domain 52 112 IPR003166 GO:0006367
Spst2g00324 255 MobiDBLite consensus disorder prediction 1 30 - -
Spst2g00324 255 MobiDBLite consensus disorder prediction 206 255 - -
Spst2g00324 255 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00324 Spst-Chr2 2523545 2526607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00324 K03137 - gmx:100788089 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00324 2 2523545 2526607 Spst3g01128 3 14625080 14628253 PCT