Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01120 ATGTTCAGATGGAGGAGTGAGAGACACAAGGTCAAAGCTGTCTTCAAACTTCACTTCCATGTCACCCAGATGGTGCAATCTGGGGTGGAATCTTTGGTGCTGTCTATAGTTCCAGGGGACATTGGAAAGGTAACTACGAGGTTAGAGAAAGCAGCAATTCGTGGTGGAGTTTGTAGATGGGAGAATCCTGTCTATGAAACAATCAAGCTTTTTCAGGAGCCCAAGACTGGGAAATTCAGTGAGAGAGTATATTATTTTGTGGTTTCAACGGGGTTATCAAAAGCTAGCTCCTTTGGGGAAGTTTCTGTAGACTTTGCTGAGTATGCTGGGGCTACGAAGCCCTCCACTGTCTCCCTTCCCATCAAGAATTCTCGTTGTGATGCCGTCTTGCATGTGTCAATCCAGAGGCTACAAGAAAATAATGATAAAAGAGAGGAAGAGGATTGTGAAGGCGCCAAACTAAAACCCAATGATAGAAGTTTGAGGACCTACTTGAGCAATGGAGAGATAGATGCAAGCTCGAAATGTGATTCTTCTGAAGATGTGTCTGCTAAAGCAAATGCCAATGGAGCTGAATTGAATGCTGATTGTAGGACATCTAGTGGATCTGACATTACAACGTTAAGTTCTGATGGAAGCTCTGGACTTGATACTCCCCGAGAACTAGGACTAAGAAATGGTGGCATCCACCCCAACAACAACGGTTTTCTTTCAGATGTGAGCCACATTTCTGATCCCCAAAAAGCTGCTGTAAATGATATTCATCAGAGATCACACTGGGACTGGTCAGCTGGTTCAGAACACAGTTTGAGTATGGATGGTTCAACAAATGGTTCTCAGGATGCTCTTCCTAGGGAAAGATCTCAAGCATCTGATATGGAAATTGAAAGACTCAAGGCTGAACTTGCTGCTTTGGCCAGGCATGTGGATATGTCTGACTTGGAACTGCAAACTCTAAGGAAGCAAATTGTAAAGGAAAGCAAAAGAGGACAGGAGCTCTCAAAGGAAATTATGTGCTTGAAAGAGGAAAGAGATGCACTCAAGATTGAATGTGACAATCTCAGATCTTTTCATAAACGAATGGAGGAAGGCAAAGTGAGTAACAGGCCACCACTGGATAGTGGGGATCTTTGTACTCTTGTTGATGAAATTAAACAAGAATTGAAATATGAGAAGGAGTTGAATGCAAATCTCCAATTACAGCTAACGAAGACACAAGAGTCGAACTCCGAACTAGTTCTTGCTGTGAAGGACCTGGATGAATTGCTGGAGCAGAAAAATAGGGAATTGTGTAGTCTTTCCTATAAGCATGAAGAGGGTAAAATCTCCCATGAGTCAGGGGGAAAGAAGCTATTTAATTCTGAATCGGATGACGAACAGAAAGAATTGGAAGAGCTAGTCAAGGATCACAGCAATGCTCAGGAGACTCACTTACTTGAACAAAAGATTATAGATCTCTATGGGGAAATCGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAAATGGAGCAGCTTGCTCTAGACTATGAGATATTGAAACAGGAAAACCATGATATTGCATATAAGCTGGAACAAAGCGAACTTCAAGAACAACTAAAGTTGCAGTATGAATGCTCATCTCCTCCTCCTGCTGTTGATGATATTGAAGCCCATGTTCAGAATCTAGAAAATCAACTCATGCAACAGTCAGAAGAATTCTCAAATTCTCTGGCTACCATCAAGGAACTTGAAACACAAATAAGCAGATTAGAAGAAGAACTGGAGAATCAAGCCCAAGGGTTTGAAGCTGATCTAGATGTCCTTACACGTGCCAAAGTTGAGCAGGAGCAAAGAGCCATCCATGCAGAAGAAGCTTTGCGAAGCACCAGACTTAAAAATGCTAACACTGCTGAGAGGCTTCAAGAAGAATTTAGAAGGCTCTCAATGCAAATGGCCTCTACATTTGATGCCAACGAGAAGGCTGCCATGAGGGCATTGACAGAAGCAAGTGAACTTCGTGCACAGAAAAGACTAGTGGAAGCAATGCTGCACAGAGCCAATGACGAGCTTCAGTCAGCCAAAGCTGATTATGAGGTAAAAGTGGATGAACTTTCCAACAAAATAGACATGATGGAAGCTCAGAAACAACAGATGTTGTCAGAAATTGAGGACAAGTCCAAGCAGCTCGAAAATCAGAAGAAGCACGATGAACAAGTTAGTAGAAATTTCTTCGAAGAGATCCAGATGCTAAAAGCTGAAAATGAAAGGCTTAAAGTGGAGATTTCATGCCTCTCTGAGCAAGTAGAACAAAAGGATATCTTAAGAAATGACTTGGAACTTTTGAAGAAATCGCTTGAGGAATCTGAGGCTCGGTTACATAGTAGAACAGTGGAAAGAAATGAGCTGGTGAGTGAAATTGCTTTGTTGAAAAAGGAAGCAGAAAGGTCACTTGATGAGCTAAATCGGATGAAGCATCTCAATGATGAAAAAGAGACGGAAAGTAGAGTTTTGCAGTCAGAGTTAGAAACGCTCAGATATCAATATAGTGACTTGAAAACTGCTTGTATTAAGGATGAAGCTGAGAAAGAAAACCTAAGAAAGCATGTTTTCCAGCTGAAGGGTGAATTAAAGAAGAAGGATGACACATTAACCAACATCGAGAAGAGGTTCAAGGATAGCAATGGACGCACACAACTTTCTGATGGAACTAAAACCAATTTAAAGAACAAAAACGGTGCTTCAATTCCTCAGAGTTCAAAAGAAATGGCAAATCTGAGGGAGAAAATTAAAACGCTTGAGGGCATGATAAAGTCCAAGGAAACTGCTTTGGAAATGTCAGCTTCTTCATTTTTGGAGAAGGAAAGGGAGCTCCAATCCAAAATTGAGGAACTGGAGGACAAAGTGGAGGAATTCAATCAGAGCATTGCTTTGCAAAAGGTTACTACTTCAAATGATACTACAAGTGTGGTTGAAGAAAATGGTGTTGCAGAGACCCTGTACAAGAGTGATGTATATGTGTTGGAGAAAGAAGCAGAAATATCCACAATGGATAATAATGGAGATGGCAATCTTTGTGAAACTTTAGCTGAATATTCGCTGCTGAAAGAAAGAAACAACTTAATGGAAACTGAGCTGAAAGAGTTACAACAAAGATACTCAGACATGAGTCTCAAATTTGCCGAGGTAGAAGGTGAAAGACAAAAGCTTGTGATGACTGTAAGAAACCTCAAGAATGCTCGGAAGGCCCAATGA 3237 0.4121 MFRWRSERHKVKAVFKLHFHVTQMVQSGVESLVLSIVPGDIGKVTTRLEKAAIRGGVCRWENPVYETIKLFQEPKTGKFSERVYYFVVSTGLSKASSFGEVSVDFAEYAGATKPSTVSLPIKNSRCDAVLHVSIQRLQENNDKREEEDCEGAKLKPNDRSLRTYLSNGEIDASSKCDSSEDVSAKANANGAELNADCRTSSGSDITTLSSDGSSGLDTPRELGLRNGGIHPNNNGFLSDVSHISDPQKAAVNDIHQRSHWDWSAGSEHSLSMDGSTNGSQDALPRERSQASDMEIERLKAELAALARHVDMSDLELQTLRKQIVKESKRGQELSKEIMCLKEERDALKIECDNLRSFHKRMEEGKVSNRPPLDSGDLCTLVDEIKQELKYEKELNANLQLQLTKTQESNSELVLAVKDLDELLEQKNRELCSLSYKHEEGKISHESGGKKLFNSESDDEQKELEELVKDHSNAQETHLLEQKIIDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKLQYECSSPPPAVDDIEAHVQNLENQLMQQSEEFSNSLATIKELETQISRLEEELENQAQGFEADLDVLTRAKVEQEQRAIHAEEALRSTRLKNANTAERLQEEFRRLSMQMASTFDANEKAAMRALTEASELRAQKRLVEAMLHRANDELQSAKADYEVKVDELSNKIDMMEAQKQQMLSEIEDKSKQLENQKKHDEQVSRNFFEEIQMLKAENERLKVEISCLSEQVEQKDILRNDLELLKKSLEESEARLHSRTVERNELVSEIALLKKEAERSLDELNRMKHLNDEKETESRVLQSELETLRYQYSDLKTACIKDEAEKENLRKHVFQLKGELKKKDDTLTNIEKRFKDSNGRTQLSDGTKTNLKNKNGASIPQSSKEMANLREKIKTLEGMIKSKETALEMSASSFLEKERELQSKIEELEDKVEEFNQSIALQKVTTSNDTTSVVEENGVAETLYKSDVYVLEKEAEISTMDNNGDGNLCETLAEYSLLKERNNLMETELKELQQRYSDMSLKFAEVEGERQKLVMTVRNLKNARKAQ 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01120 1078 Coils Coil 547 606 - -
Spst3g01120 1078 MobiDBLite consensus disorder prediction 194 230 - -
Spst3g01120 1078 Coils Coil 794 842 - -
Spst3g01120 1078 Coils Coil 295 350 - -
Spst3g01120 1078 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 9 143 IPR019448 -
Spst3g01120 1078 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1076 - -
Spst3g01120 1078 MobiDBLite consensus disorder prediction 891 915 - -
Spst3g01120 1078 MobiDBLite consensus disorder prediction 265 286 - -
Spst3g01120 1078 Coils Coil 910 937 - -
Spst3g01120 1078 MobiDBLite consensus disorder prediction 194 216 - -
Spst3g01120 1078 Coils Coil 1026 1060 - -
Spst3g01120 1078 Coils Coil 942 976 - -
Spst3g01120 1078 Coils Coil 449 476 - -
Spst3g01120 1078 Coils Coil 664 786 - -
Spst3g01120 1078 MobiDBLite consensus disorder prediction 887 915 - -
Spst3g01120 1078 Coils Coil 381 401 - -
Spst3g01120 1078 Coils Coil 409 429 - -
Spst3g01120 1078 Coils Coil 483 517 - -
Spst3g01120 1078 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Spst3g01120 1078 MobiDBLite consensus disorder prediction 265 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01120 Spst-Chr3 14565098 14569956 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01120 - - gmx:100819574 1771.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01120 3 14565098 14569956 Spst3g01120 3 14565098 14569956 ECH
Spst2g00322 2 2492920 2497768 Spst3g01120 3 14565098 14569956 PCT