Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00322 ATGTTTCGTTCTGCAAGATGGAGGAGCGACAAGAACAGGGTCAAAGCAGTTTTCAAGCTCCACTTCCATGCCACCCAGGTGTTTCAATCTGGAATGGATGCATTGGTGCTGTCTATTGTTCCAGGGGACATTGGAAAGCCAACTACGAAATTGGAGAAAGCTACAATTCGAGATGGAACTTGTAGATGGGAAAATCCGGTGTATGAAACTGTGAAGTTTGTTCAGGAACCTAAGACGGGGAAAATCAGTGATAGAATATATCATTTTTTGGTTTCAACGGGATTACCAAAAGCTAGTTCCATTGGGGAGGTTTCTATAAATTTTGCTGATTATGTGGAAGCCACAAAGCCCTCCTCTGTCTCTCTTCCCATCAGGATTTTTCATTGTGATGCTGTTTTGCACGTATCTCTCCAGAGGCTGCAAGAAAACGGCGATCGAAGAGAGGAAGATGAATGCGAAGATTCCAAACTGAAATATGATGATAGAAGCTCAAGGAACCAATTACACAACGGCGATACGGATGAAACCAGCAAATGTTATTCTTCTGAAGATGTCTCTGCCAAAGCAACCATCAATAGAGCTGAATTGAGTTCTAATTACAGGACATCCAGTGGCTCTGATATGACATTGTCGAGTTCTGATGACAGCTCTGGACTTGATACTCCCCGCGAAAGTGGACCTAGAAAAAAGAACATCCACCTCAACACAAAAGGGTTTCTTCCAGATCCAGTTCTGCACCATGCTTCAGAACCTCAAAACCTTGCTCTCAATGCCTCAACATCACTGCATGATGTACATCAGAGATCACACTGGGACTGGTCAGCTGGTTCGGAGCACAGGCTTAGTACAGATGATTCAACATATGGTTCTCATCATAATTCTCTTCTAAAGGAAAGCTCCCAACAACCTTCCTCGTTAGAGGTTGAAAGTCTCAAAGCTGAACTTGCTGCTTTGGCCAGGCAAGTGGATGTGTCGGACTTGGAATTACAGACCCTTAGGAAGCAAATTGTGAAGGAATGCAAACGGGGGCAGGATCTTACGAGGGAAATCATTGTCTTGAAAGAGGAAAGGGATGCATTCAAGACAGAATGTGACAATCTCAGGTCTTTTCAGAAACGCATGGAAGAGGCCAAAGTGAGAAACAGGTCACAATTGGAAGGTGGAGACCTTCATGCTCTTGTTGAAGAAATAAGACAAGAATTGGATTATGAGAAGGACCTAAATGCAAATCTCCGGCTGCAGTTAAAGAAGATGCAAGAATCTAATGCCGAACTGGTCCTTGCTGTGCAGGACCTGGATGAAATGTTGGAGCAGAAAAATAGGGATTTGTGTAACCATGCCTATGAGGATAAAAATTCCCCAGATAAAAGGATAAACCTCTCTAAATGTGAAACGGATGATGATGATTATGAAGAACAGAAAGCATTGGAGGAGCTTGTTAAGGAACACACCGAAGCCAAGGAGACGCACTTACTTGAGAAGAAAATAGTAGACCTCTATGGTGAGATAGAGATGTACAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAACAGCTTGCCCTGGACTATGAGATACTGAAGCAGGAAAACCATGGCCTTACATATAAGCTGGAGCAAAGCGAACTGCAAGAACAGTTGAAAATGCAGTATGAATGTTCATCTTCTCCTTCTGCAATGAATGAAATTGAAACCCACATCAAGAATCTGGAAAGTCAACTAAAGGAACAATCAGAAGATTTCACAAATTCTCTGGCTACCATCAAGGCACTTGAAACCCATATCAGAAGATTAGAAGAGGAAATGGAGAAGCAAGCACAAGGATTTGAAGCTGATCTAGAAGCAGTGATCCGTGACAAAGTTGAACAAGAACAAAGAGCTATCCAAGCCGAGGAAGCTTTGCAAAAGACCAGAATGAAAAATGCTAAAGCTGCTGAGAGGCTTCAAGAGGAATTCCGGAGGCTCTCCACACAAATGACCACCACATTTGATGCGAATGAGAAAGCTACCATGAAAGCATTGACAGAAGCGAGTGAAGTGCGTGCACAGAAAAGTGTACTGGAAGAAAAGCTGCATAAAGTTAAAGAAGAACTTGAGTCAACTACTGCTGAGTATGATGTAAAACTGAACGAACTTTCCAACCAAATAGATATGATGAAAGTTCAGATACAACAGATGTTGTTGGAAATTGCGGATAAGTCCAAGCAGCTTGAAAAACAGAAGAAGCACGAGGAAAAAGTTAGTAGGGATTTCTCTGATGAGATCGGATTACTAAAAGCTGAGATTGGAAAGCTTAATCTGGAGATTTCATGCTTACTTGAGCAAGTAGAAGAAAAAGAAATTTTAAGAACTGACTTGGAACTAATGAAGAAATCAGTTGAGGAATTTGAGACACTTTTACAGAAAGGAACTGTGGAAAGAAATGAATTGTTGGGAACAATTGAATTGTTGAAGAAGGAGGCAGAAGAGTCACTTAATGAGCTAAACAGAATGAGACAGCTCAAGAATGACAAAGAAACTGAGGTTAAAGTTTTGCAGTCAGAGTTGGAGGCCGTTAGAGCTCAGTACAATGACCTGAAACTCTCTCTTTCTAAGGACGAAGTTGAGAAAGAAAAACTGCTAAAGCAAGTTTCCCAGCTAAAGGTTGAATTGAAGAAGAAAGATGATGCTTTAATAAGCGCCGAGAAGAGGTTCAGGGAAAATAATGCACGCGCACAACTTACTGATGGAACTAAAAATATTCTAAAGAACAAAAAAACTGCTTCAGTTCCTCAGAATTCAAAGGAAATAGCCAGTCTGAGGGAGAAAATAAAAACGCTTGAGGGCTTGATACAGAGAAAGGAAATAACCTTGGAAACTTCAACAACTTCATTTTTGGAGAGGGAAAAGGAACTCCAGACCAAAATTGAGGAGCTGGAGAACAAAGTAGAGGAATTCAACCGGAGTATTGCTTTGCAGAAGGTGGTTCAGGATATAAGTATTACTACTTCCAATGAGATACCTGGAGATGTAAGAAGTACAGTCGAGCATATCAATGCTGCTACATTGTTATTCAAGAGGTTTGACTATTTTACTTTCCTTCAATTTTCTGGCCATGGCAGTGACATAAAGTTCCAAGAGAAGAAAGAAGCAGGAATCTCCATAAACGATACTGTAGATATAGTAACTGAGCTAACATCATTGAAGGAAAGAAACAAATCAATGGAAAGCGAACTTAAAGAGATGCAAGAGAGATACTTAGAAATGAGCCTCAATTTTGCGGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACTGTACGGAATCTTAAGAGTATCCAGAAAGGCTAA 3330 0.4096 MFRSARWRSDKNRVKAVFKLHFHATQVFQSGMDALVLSIVPGDIGKPTTKLEKATIRDGTCRWENPVYETVKFVQEPKTGKISDRIYHFLVSTGLPKASSIGEVSINFADYVEATKPSSVSLPIRIFHCDAVLHVSLQRLQENGDRREEDECEDSKLKYDDRSSRNQLHNGDTDETSKCYSSEDVSAKATINRAELSSNYRTSSGSDMTLSSSDDSSGLDTPRESGPRKKNIHLNTKGFLPDPVLHHASEPQNLALNASTSLHDVHQRSHWDWSAGSEHRLSTDDSTYGSHHNSLLKESSQQPSSLEVESLKAELAALARQVDVSDLELQTLRKQIVKECKRGQDLTREIIVLKEERDAFKTECDNLRSFQKRMEEAKVRNRSQLEGGDLHALVEEIRQELDYEKDLNANLRLQLKKMQESNAELVLAVQDLDEMLEQKNRDLCNHAYEDKNSPDKRINLSKCETDDDDYEEQKALEELVKEHTEAKETHLLEKKIVDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHGLTYKLEQSELQEQLKMQYECSSSPSAMNEIETHIKNLESQLKEQSEDFTNSLATIKALETHIRRLEEEMEKQAQGFEADLEAVIRDKVEQEQRAIQAEEALQKTRMKNAKAAERLQEEFRRLSTQMTTTFDANEKATMKALTEASEVRAQKSVLEEKLHKVKEELESTTAEYDVKLNELSNQIDMMKVQIQQMLLEIADKSKQLEKQKKHEEKVSRDFSDEIGLLKAEIGKLNLEISCLLEQVEEKEILRTDLELMKKSVEEFETLLQKGTVERNELLGTIELLKKEAEESLNELNRMRQLKNDKETEVKVLQSELEAVRAQYNDLKLSLSKDEVEKEKLLKQVSQLKVELKKKDDALISAEKRFRENNARAQLTDGTKNILKNKKTASVPQNSKEIASLREKIKTLEGLIQRKEITLETSTTSFLEREKELQTKIEELENKVEEFNRSIALQKVVQDISITTSNEIPGDVRSTVEHINAATLLFKRFDYFTFLQFSGHGSDIKFQEKKEAGISINDTVDIVTELTSLKERNKSMESELKEMQERYLEMSLNFAEVEGERQKLVMTVRNLKSIQKG 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00322 1109 Coils Coil 807 897 - -
Spst2g00322 1109 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 145 IPR019448 -
Spst2g00322 1109 MobiDBLite consensus disorder prediction 198 246 - -
Spst2g00322 1109 Coils Coil 930 950 - -
Spst2g00322 1109 Coils Coil 1058 1092 - -
Spst2g00322 1109 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Spst2g00322 1109 MobiDBLite consensus disorder prediction 198 220 - -
Spst2g00322 1109 MobiDBLite consensus disorder prediction 142 181 - -
Spst2g00322 1109 Coils Coil 677 743 - -
Spst2g00322 1109 Coils Coil 496 530 - -
Spst2g00322 1109 Coils Coil 394 442 - -
Spst2g00322 1109 Coils Coil 955 989 - -
Spst2g00322 1109 MobiDBLite consensus disorder prediction 142 184 - -
Spst2g00322 1109 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1108 - -
Spst2g00322 1109 MobiDBLite consensus disorder prediction 277 304 - -
Spst2g00322 1109 MobiDBLite consensus disorder prediction 280 304 - -
Spst2g00322 1109 Coils Coil 560 647 - -
Spst2g00322 1109 Coils Coil 308 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00322 Spst-Chr2 2492920 2497768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00322 - - pvu:PHAVU_002G155900g 1819.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00322 2 2492920 2497768 Spst3g01120 3 14565098 14569956 PCT