Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01057 ATGAATGGTATTCCCAAGCACGAGCGCCGGTGGGCGTCCGACACTGTTCCTGGAAGAGCAACTGTTAGCGCCGGAACTTCGCCGGGAACTGAGTCGAACTCCGCTGCGGAGGAGTTCGTCGAGGTTACGCTTGATCTTCAAGATGATGACACTATCGTTCTTCGAAGCGTCGAGCCAGCTTCGGTGATTAACGTCGAGGAGAGCGTCGCCGGCAGCGGATACGAGACTCCGGCGTCGGTTACGCGGTCTCCGACCATCCGGCGGAGCTCGTCGCGAGGGTTCCGGCAGTTCTCGCAAGAGCTGAAGGCGGAGGCGGTGGCCAAGGCGAGGCAGTTCTCGCAGGAGCTTAAATCGGAGTTGCGGCGGTTCTCGTGGAGCCACAGCCAGGCTTCGCGCACGCTCTCGTCTTCCTCCGCTCCGAACGGTGCCGGAGGCGGATTCGAAACGGCGCTGGCGGCTCGCGCTCTCAGGAGGCAACGCGCGCAGCTTGATCGCACGCGCTCCGGCGCGCACAAAGCGCTTCGTGGTCTGAAATTTATCAGCAGCAAATCTAATGGTGTTGATGCGTGGAACGAGGTGCAGAACAACTTCGATAGACTCTCAAAGGACGGTTTTCTCTATCGCGCCGATTTCGCTCAATGCATAGGTATGAAGGATTCGAAGGAGTTTGCTTTGGAGCTGTTTGATGCTCTGAGTCGGAAACGAAGGTTGAGAGTTGACAAGATCAACAGGGAAGAACTGTTCGAGTTCTGGTCGCAAATTACCGATCAAAGTTTCGATTCGCGGCTTCAGATCTTCTTCGACATGGTGGACAAGAACGAAGATGGGAGAATCACCGAAGAAGAAGTGAAAGAGATAATCACGTTAAGCGCTTCAGCAAATAGGTTGTCCAGATTGAAAGAACAGGCCGAAGAATATGCAGCTCTGATCATGGAAGAGTTAGACCCCGAAGGACTTGGTTACATCGAGCTATGGCAACTGGAGACGCTTCTTTTACAAAAAGACACGTATCTCAACTACAGTCAAGCTCTAAGTTACACAAGCCAAGCTCTGAGCCAGAATCTACAGGGGTTAAGGAAGAAAAGTCCAATACGAAGAATGAGCCGAAGATTGATCTACTATTTGCAAGAGAATTGGAGGAGACTTTGGGTTTTAACACTGTGGGGTTGCATAATGATTGGGCTGTTCACGTGGAAGTTTATCCAGTACAAGCAGAAAGATGCATTTCATATCATGGGTTACTGTCTTCCCACGGCTAAAGGTGGGGCTGAGACTCTAAAGTTCAACATGGCCCTTATACTCTTGCCTGTGTGCAGGAACACCATAACATGGCTCAGGTCTACAACCAAGCTGGGCTATGCTGTACCTTTTGATGACAACATTAACTTTCACAAGACAATTGCTGGGGCCATTGTGATTGGTATTCTACTTCATGCCGGGGATCACCTTGCTTGTGATTTTCCACGACTTGTAAATACGTCTGAAGAAAGTTATGAAAGGTATTTGAAAGGTGTATTTGGTCATCACAAGCCCAGTTACGGAGACCTAGTTAAAGGGGTCGAGGGTGTGACTGGAATTTTGATGGTGGTTCTTATGATAATAGCATTTACACTTGCAACCAAATGGTTCCGGAGAAATCTCATTAAGCTGCCTAAACCATTTAGTAGGTTCACTGGCTTCAATGCCTTCTGGTATTCACATCATCTGTTTGTCATTGTCTATGTCCTTCTCATCATCCACGGAACAAAACTTTACCTCGTGCATAGATGGTACCTTAAAACGACATGGATGTATCTTGCGGTTCCAGTTTTACTTTATGCGTCTGAGAGAATAATAAGACTATTTCGTTCTGGTTTGTATACAGTCCGTCTTGGAAAGGTTGCCATATATCCTGGAAATGTTCTCACCTTGCAAATGTCTAAACCTCCTCAATTTCGCTACAAGAGCGGACAATACATGTTTGTACAGTGTCCTTCTGTTTCACCGTTTGAGTGGCATCCGTTCTCTATTACCTCAGCCCCTGGCGACGACTACCTGAGTGTTCATATTCGGCAACTGGGTGATTGGACACAGGAGCTTAAAAGGGTGTTCTCTGAGGCCTGTGACCCTCCTGTATCCGGGAAGAGTGGGCTTCTCAGGGCTGATGAAACCACTAAGAAAAGTTTGCCGAAGTTAAAGATCGATGGACCTTACGGTGCACCGGCACAAGATTATAAAAAATATGATGTTTTGTTACTAGTCGGTCTCGGGATAGGAGCAACACCTTTCATCAGCATTCTAAAAGATCTTCTCAACAACATCATCAAAATGGAGGAAATGGCGGATTCAATCTCGGATATAAGTAGAGGTTCAGACCTTAGTGTTGGGAGTACTGCTGATTCACCATCTCTTAATAAAATTGCACCAAAACGGAAGAAAACACTGAAGACTACCAACGCTTATTTTTACTGGGTTACAAGAGAGCAAGGCTCTTTTGATTGGTTCAAAGGAGTCATGAATGAAGTAGCAGAGCTTGATCAAAGGGGTGTCATTGAGATGCACAACTACTTGACTAGCGTATACGAGGAAGGGGATGCGAGATCCGCCCTCATCACCATGGTACAAGCACTCAACCATGCGAAAAATGGAGTTGACATTGTTTCTGGGACTAGACCCCATTTTAATGGCATAATCGGAGTGAGTAAATTTAAAACCTCGCTTGCTTCTTTGAATCCCTACTACCAGGTGCGAACTCATTTTGCTAGGCCTAACTGGAAGAAGGTTTTCTCTAAAATGTGCTCCAAACACTTTAATGGACGAATAGGGGATTCCAGGAATTCTAGAAAACTAGTGAAGCAAATAACTCACCTCTGCTTCTGCTTGGATCCTAACTGGGAGTGGGGGATTATATATATCTATGTAGACGAGATAGAGTAA 2916 0.4691 MNGIPKHERRWASDTVPGRATVSAGTSPGTESNSAAEEFVEVTLDLQDDDTIVLRSVEPASVINVEESVAGSGYETPASVTRSPTIRRSSSRGFRQFSQELKAEAVAKARQFSQELKSELRRFSWSHSQASRTLSSSSAPNGAGGGFETALAARALRRQRAQLDRTRSGAHKALRGLKFISSKSNGVDAWNEVQNNFDRLSKDGFLYRADFAQCIGMKDSKEFALELFDALSRKRRLRVDKINREELFEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIITLSASANRLSRLKEQAEEYAALIMEELDPEGLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRKKSPIRRMSRRLIYYLQENWRRLWVLTLWGCIMIGLFTWKFIQYKQKDAFHIMGYCLPTAKGGAETLKFNMALILLPVCRNTITWLRSTTKLGYAVPFDDNINFHKTIAGAIVIGILLHAGDHLACDFPRLVNTSEESYERYLKGVFGHHKPSYGDLVKGVEGVTGILMVVLMIIAFTLATKWFRRNLIKLPKPFSRFTGFNAFWYSHHLFVIVYVLLIIHGTKLYLVHRWYLKTTWMYLAVPVLLYASERIIRLFRSGLYTVRLGKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPSVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSEACDPPVSGKSGLLRADETTKKSLPKLKIDGPYGAPAQDYKKYDVLLLVGLGIGATPFISILKDLLNNIIKMEEMADSISDISRGSDLSVGSTADSPSLNKIAPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRPHFNGIIGVSKFKTSLASLNPYYQVRTHFARPNWKKVFSKMCSKHFNGRIGDSRNSRKLVKQITHLCFCLDPNWEWGIIYIYVDEIE 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01057 971 ProSiteProfiles EF-hand calcium-binding domain profile. 258 293 IPR002048 GO:0005509
Spst3g01057 971 FunFam Respiratory burst oxidase homolog A 163 279 - -
Spst3g01057 971 Gene3D - 163 279 - -
Spst3g01057 971 PANTHER NADPH OXIDASE 223 935 - -
Spst3g01057 971 SUPERFAMILY EF-hand 190 340 IPR011992 -
Spst3g01057 971 ProSitePatterns EF-hand calcium-binding domain. 271 283 IPR018247 -
Spst3g01057 971 Pfam Respiratory burst NADPH oxidase 162 261 IPR013623 GO:0004601|GO:0050664
Spst3g01057 971 SUPERFAMILY Riboflavin synthase domain-like 620 733 IPR017938 -
Spst3g01057 971 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 724 769 IPR039261 -
Spst3g01057 971 MobiDBLite consensus disorder prediction 19 36 - -
Spst3g01057 971 Gene3D Translation factors 609 699 - -
Spst3g01057 971 SFLD NADPH oxidase subgroup (NOX) 104 934 - -
Spst3g01057 971 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 617 737 IPR017927 GO:0016491
Spst3g01057 971 Pfam FAD-binding domain 621 734 IPR013112 GO:0016491
Spst3g01057 971 Pfam Ferric reductase like transmembrane component 421 578 IPR013130 -
Spst3g01057 971 Pfam Ferric reductase NAD binding domain 741 935 IPR013121 GO:0016491
Spst3g01057 971 PRINTS Cytochrome B-245 heavy chain signature 723 736 IPR000778 GO:0016020|GO:0016491
Spst3g01057 971 PRINTS Cytochrome B-245 heavy chain signature 746 763 IPR000778 GO:0016020|GO:0016491
Spst3g01057 971 PRINTS Cytochrome B-245 heavy chain signature 523 546 IPR000778 GO:0016020|GO:0016491
Spst3g01057 971 MobiDBLite consensus disorder prediction 1 36 - -
Spst3g01057 971 CDD EFh 222 288 IPR002048 GO:0005509
Spst3g01057 971 FunFam Respiratory burst oxidase homolog A 608 700 - -
Spst3g01057 971 CDD NOX_Duox_like_FAD_NADP 626 888 - -
Spst3g01057 971 Coils Coil 289 309 - -
Spst3g01057 971 Gene3D - 732 946 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01057 Spst-Chr3 13894885 13905858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01057 9 935 Miscellaneous Gene Families AT1G64060 75.641 0.0 1445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01057 K13447 - gmx:100801077 1663.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00276 2 2080064 2089369 Spst3g01057 3 13894885 13905858 PCT