Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00276 ATGAACGGTGCCCCCAAACACGAACGCCGCTGGGCGTCCGACACGGTGCCGGAGATAGCATTCGTCAGCGGCGGGACATCGCCGGGAACCGAGTCCTTCTCCGTCGCCGACGAGTACGTTGAGGTCACTCTCGACGTTCAAGACGATCGCACCATCGTTCTCCGGGGCGTTGAGCCGGTGACTGTCGTTAACGTCGACGACGGCGTTTCCGCAAGCGGAAACGACACTCCGGTGTCCGCAGCGTGGTCGCCGTCGATCAGGAGGAGCTCTCCCCATCGATGGCGGCAGTTTTCACAGGAGCTTAAGGCCGAGGCGGTTGCGAAGGCGAGGCAGTTCTCGCAGGAGTTCAAGGCGGAGCTGCGGCGGTTCTCGTGGAGCCAGGGTGGATCTGAAACTGCTTTGGTGGCACGAGATCTTAGGAAGCAGCGTGCTCAGCTTGAACGCAACCGCTCCGGTACGAAGAAAGCACTCCGTGGACTGAAATTCATTAGCAGTAAATCCAATGGCGTTGATGCCTGGAACGAGGTGCAAAGCAATTTCGATAGTCTTGCTAAGGACGGTTTTCTCTACCGCACCGATTTTGCGCAATGCATAGGGATGAAGGACTCTAAGGAGTTCGCTCTGGAACTATTCGATGCTCTGGGTCGTAGACGAAGACTCAGGGTTGAAAAGATCAGCAGAGACGAGCTTAGCGAGTTCTGGTCGCAAATTACCGATCAAAGCTTTGATTCGCGGCTCCAGATCTTCTTTGATATGGTGGACAAGAACGAAGATGGTAGAATCACCGAAGAAGAAGTGAAAGAGGACGTTTCCTATTATTCCAAATCAACAAAGGATATTGTTGGGTGGCATGCGTTGAAAATCATTATGCTAAGTGCTTCAGCAAATAAGTTATCCAGATTGAAAGAGCAGGCGGAAGAATACGCAGCTCTGATCATGGAAGAGTTAGACCCAGAAAGACTCGGCTACATTGAGTTATGGCAATTGGAGACGCTTCTGTTACAAAAGGACACGTATCTCAACTACAGCCAAGCACTAAGCTACACCAGTCAAGCTTTGAGCCAGAACCTACAAGGAAAAAGGGCAAGAAGCCCAATACGTAGGATGAGCCGCAGGATGATCTACTATTTGCAGGAAAATTGGAGGAGACTTTGGGTTTTAGCACTGTGGGTTTCCGCCATGATCGGGCTGTTTACGTGGAAGTTCATCGAGTACAAGCGAAAAAATGCTTATCACGTCATGGGTTACTGTCTCCTCGCGGCCAAAGGTGCCGCTGAGACTCTCAAGTTGAACATGGCACTTATACTATTTCCGGTCTGCAGAAATACCATAACGTGGCTCAGGTCCACCAAGTTGGCTTATGTTGCACCTTTCGATGATAACATCAACTTTCATAAGATTCTAGGGAAGGATGTAATGTTAAGTTATGGATGTTTACAGACAATTGCCGCAGCAGTAGTGATTGGTGTTATACTTCATGCCGGGAATCACCTTGCTTGTGATTTTCCAAGACTTGTAAATTCGTCCGAAAAAAATTATGCGACGTATTTGGGTGGCGTATTTGGTGATCATAAACCCAGTTACGGGGACCTCGTTATCGGGGTTGAGGGCATGACTGGAATTCTGATGGTGATTTTGATGGCAATAGCATTTACTCTTGCAACAAAATGGTTCAGAAGAAATCTTATTAAGCTTCCTAAACCGTTTAATAGGCTCACTGGTTTCAATGCGTTCTGGTACTCACACCATCTATTTGTCATTGTCTATGTCCTGCTCATCATTCATGGTGTAAATCTTTACCTAGAGCGCAAATGGCACCTTCAAACGACATGGATGTATCTTGCAGTTCCAATTTTACTTTATGTGGGCGAAAGAACGCTAAGATTCTTCCGTTCTGGTTTCTATACAGTCCGTCTTATGAAGGTTGCCATTTATCCTGGAAATGTTCTGACATTGCAAATGTCGAAGCCCCCTCAATTTCGTTACAAGAGTGGACAATACATGTTTGTGCAATGTCCGGCTGTTTCTCCATTTGAGTGGCATCCGTTTTCTATTACCTCTGCCCCTGGCGATGATTACCTAAGTGTTCACATACGGCAACTGGGAGATTGGACACAGGAGCTCAAAAGGGTATTCTCTGCGGCCTGTGAGCCTCCCGTAGCTGGGAAGAGCGGCCTTCTCAGGGCCGATGAAACCACCAAGAAATGCTTACCAAAGCTAAGGATAGATGGACCTTACGGTGCGCCAGCACAAGACTACAGAAATTATGATGTCCTACTACTTGTCGGTCTCGGAATAGGAGCAACACCTTTTATTAGCATTCTAAAAGATCTTCTCAACAACATTGTTAAAATGGAGGAGCTGGCGGATTCAGTCTCTGATTCAAGTAGAGGTTCAGACCTTAGCCCTGGGAGTGCAGATTCACTGTCTTTTAATAAGATTTCTCCGAAAAGGAAGAAGACACTGAAGACTACCAACGCTTATTTCTACTGGGTAACAAGAGAACAAGGTTCTTTCGACTGGTTTAAAGGGGTCATGAATGAAGTTGCCGAACTTGATCAAAGGGGTGTTATTGAGATGCACAACTACTTAACCAGCGTATACGAGGAAGGCGATGCCAGATCCGCCCTCATTACAATGGTGCAAGCCCTCAACCACGCAAAAAATGGAGTTGATATTGTTTCTGGGACTAGGGTGAGAACTCATTTTGCTAGGCCTAACTGGAAGAAGGTTTTCTCTAGAATATGTTCTAAGCACTGCAATGGACGAATAGGGGTGTTCTACTGTGGCGCACCGGTTTTGGCCAAAGAATTAAGCAAGCTCTGCTTCGAGTTCAACGAAAAAGGTCAAACAAAATTTGAGTTCCATAAGGAACATTTCTAA 2883 0.4703 MNGAPKHERRWASDTVPEIAFVSGGTSPGTESFSVADEYVEVTLDVQDDRTIVLRGVEPVTVVNVDDGVSASGNDTPVSAAWSPSIRRSSPHRWRQFSQELKAEAVAKARQFSQEFKAELRRFSWSQGGSETALVARDLRKQRAQLERNRSGTKKALRGLKFISSKSNGVDAWNEVQSNFDSLAKDGFLYRTDFAQCIGMKDSKEFALELFDALGRRRRLRVEKISRDELSEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEDVSYYSKSTKDIVGWHALKIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGKRARSPIRRMSRRMIYYLQENWRRLWVLALWVSAMIGLFTWKFIEYKRKNAYHVMGYCLLAAKGAAETLKLNMALILFPVCRNTITWLRSTKLAYVAPFDDNINFHKILGKDVMLSYGCLQTIAAAVVIGVILHAGNHLACDFPRLVNSSEKNYATYLGGVFGDHKPSYGDLVIGVEGMTGILMVILMAIAFTLATKWFRRNLIKLPKPFNRLTGFNAFWYSHHLFVIVYVLLIIHGVNLYLERKWHLQTTWMYLAVPILLYVGERTLRFFRSGFYTVRLMKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSAACEPPVAGKSGLLRADETTKKCLPKLRIDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILKDLLNNIVKMEELADSVSDSSRGSDLSPGSADSLSFNKISPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSRICSKHCNGRIGVFYCGAPVLAKELSKLCFEFNEKGQTKFEFHKEHF 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00276 960 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 632 752 IPR017927 GO:0016491
Spst2g00276 960 FunFam Respiratory burst oxidase homolog A 623 715 - -
Spst2g00276 960 ProSitePatterns EF-hand calcium-binding domain. 254 266 IPR018247 -
Spst2g00276 960 Coils Coil 291 311 - -
Spst2g00276 960 Coils Coil 136 156 - -
Spst2g00276 960 Pfam Ferric reductase like transmembrane component 423 593 IPR013130 -
Spst2g00276 960 Gene3D Translation factors 624 715 - -
Spst2g00276 960 CDD EFh 224 265 IPR002048 GO:0005509
Spst2g00276 960 ProSiteProfiles EF-hand calcium-binding domain profile. 241 276 IPR002048 GO:0005509
Spst2g00276 960 Gene3D - 747 960 IPR039261 -
Spst2g00276 960 SUPERFAMILY EF-hand 171 343 IPR011992 -
Spst2g00276 960 PANTHER NADPH OXIDASE 206 960 - -
Spst2g00276 960 Pfam FAD-binding domain 635 749 IPR013112 GO:0016491
Spst2g00276 960 Pfam Ferric reductase NAD binding domain 756 942 IPR013121 GO:0016491
Spst2g00276 960 Gene3D - 146 262 - -
Spst2g00276 960 Pfam Respiratory burst NADPH oxidase 145 244 IPR013623 GO:0004601|GO:0050664
Spst2g00276 960 SFLD NADPH oxidase subgroup (NOX) 104 960 - -
Spst2g00276 960 Coils Coil 775 795 - -
Spst2g00276 960 FunFam Respiratory burst oxidase homolog A 146 262 - -
Spst2g00276 960 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 753 960 IPR039261 -
Spst2g00276 960 PRINTS Cytochrome B-245 heavy chain signature 738 751 IPR000778 GO:0016020|GO:0016491
Spst2g00276 960 PRINTS Cytochrome B-245 heavy chain signature 538 561 IPR000778 GO:0016020|GO:0016491
Spst2g00276 960 PRINTS Cytochrome B-245 heavy chain signature 761 778 IPR000778 GO:0016020|GO:0016491
Spst2g00276 960 FunFam Respiratory burst oxidase protein A 747 960 - -
Spst2g00276 960 SUPERFAMILY Riboflavin synthase domain-like 635 749 IPR017938 -
Spst2g00276 960 CDD NOX_Duox_like_FAD_NADP 639 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00276 Spst-Chr2 2080064 2089369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00276 9 960 Miscellaneous Gene Families AT1G64060 73.313 0.0 1461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00276 K13447 - gmx:100805517 1738.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00276 2 2080064 2089369 Spst2g00276 2 2080064 2089369 ECH
Spst2g00276 2 2080064 2089369 Spst3g01057 3 13894885 13905858 PCT