Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01011 ATGGCAGAAAAAAGGTTCATCGTGGAGGTGGAGAAAGCCACAGAGGGCTCAGAGGAAAGGCCATCTATGGGTCCTGTCTATCGTAGCATTTTCTGCAATGATCCAACTCCTCCTCCCATTCAAGGTCTTGAAACATGCTGGGATATTTTTAGGATGTCGGTGGAGAAATACCCTACAAAGCCAATGCTTGGTGTTCGTGAAATTGTGGATGGGAAACCTGGCAAGTACAAGTGGCAAACTTACAAAGAGGTGTACGACATGGTGGTTATAGTTGGAAACTCCATTCGTGCTTGTGGTTATGGGGATGGAGTAAAATGTGGTATTTATGGTGCCAATGGCCCAAAATGGATCATGAGCATGGAGGCTTGCAATGCTCATGGACTTTTCTGTGTTCCTTTATACGATACCTTGGGTGCTGGGGCTGTGGAATTTATTATAAGCCATGCAGAGGTCTCCATTGCATTTGTTGAAGAAAAGAAGATACCTGAGCTATTGAAGACATTTCCAAATGCAGCAAAATATATCAAGACACTTGTGAGCTTTGGAGATGTTACCCCTGAACAAAGGCAAGAACTTGAAAAGTTTGAGTTGACAATCTATTCATGGAATGAATTTTTGAAAGTGGGTCATGATCAGACTTTTGATCTTCCTGAGAAAAAGAAAAGTGACGTATGTACAATAATGTATACCAGTGGAACTACTGGTGACCCTAAGGGTGTGCTGATCTCCAATGAAAGCATCATTACACTTTTAGCTGGCATTGAGAAAGTTCTGAAGAGTTGCAATGAGAAACTGAGTGAGAAAGATGTATACTTATCATACCTTCCTCTTGCACATATATTTGATAGGGTCATTGAGGAGGCAATGATAATGCACGGTGCCTCAATAGGTTTCTGGCGAGGAGATGTCAGATTGTTACTAGAAGACATTGGGGAGCTAAAGCCAACCATTTTCGTTGCAGTTCCCCGTGTGCTTGATAGAGTATACAATGGTTTGACACAGAAGATTTCTACAGGAGGATTTATAAAACAGACAGTGTTCAATTTCGCCTACTCATACAAGTTGCATAACATAAGTAAAGGGCAAAATCATGATGAAGCATCTCCACTATTTGACAGAATTGTATTTAATAAGGTGGTAAAGCAAGGTTTGGGGGGAAGAGTGCGTATTATTTTGTCTGGAGCAGCACCTCTATCTAGACATGTGGAAGGTTTTCTACGGGTGGTGACCTGTGCTCATATCCTACAAGGATATGGTCTAACTGAAACCTGTGCTGGAACCTTTGTGTCATTGCCAAACCATAAGGACATGCTTGGAACAGTGGGGCCCCCTGTACCATATGTGGATGTGTGCCTTGAATCTATTCCTGAAATGGGATATGATGCTCTTGCAAGCACTCCAAGAGGAGAAATATGTGTGAGGGGAAGAACTGTGTTCACAGGGTACTACAAACGTGAAGACCTAACCAAAGAGGTTATGACCAATGGATGGTTCCACACAGGGGATATTGGAGAGTGGCAACCTAATGGAACCATGAAAATTATTGATAGAAAAAAAAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAACATCTGGAGAATATTTATGTTCAAGCTTCTGCTGTTGATTCTATATGGATTTATGGGAATAGTTTTGAGTCGTACCTAGTTGCTATTATTAACCCCAACAAGCCAGCACTTGAACAATGGGCAGAAGAAAATGATATAACTGCAAACTTCGATTCTCTCTGTGAAGATTCCAGGACAAAAACTTACATAATCGGAGAGCTCGTCAAGATTGCGAAGGATAAGAAGTTGAAAGGTTTTGAGTTTATTAAAGCTGTTAATCTTGACCCAGTTCCATTTGACATGGAACGTGGCCTTATGACTCCAACATTTAAGAAGAAAAGACCCGAATTGCTTAAATACTATCAGTCTGGTTGCAAAATAAAAGCACAAAATTCATAA 1977 0.4077 MAEKRFIVEVEKATEGSEERPSMGPVYRSIFCNDPTPPPIQGLETCWDIFRMSVEKYPTKPMLGVREIVDGKPGKYKWQTYKEVYDMVVIVGNSIRACGYGDGVKCGIYGANGPKWIMSMEACNAHGLFCVPLYDTLGAGAVEFIISHAEVSIAFVEEKKIPELLKTFPNAAKYIKTLVSFGDVTPEQRQELEKFELTIYSWNEFLKVGHDQTFDLPEKKKSDVCTIMYTSGTTGDPKGVLISNESIITLLAGIEKVLKSCNEKLSEKDVYLSYLPLAHIFDRVIEEAMIMHGASIGFWRGDVRLLLEDIGELKPTIFVAVPRVLDRVYNGLTQKISTGGFIKQTVFNFAYSYKLHNISKGQNHDEASPLFDRIVFNKVVKQGLGGRVRIILSGAAPLSRHVEGFLRVVTCAHILQGYGLTETCAGTFVSLPNHKDMLGTVGPPVPYVDVCLESIPEMGYDALASTPRGEICVRGRTVFTGYYKREDLTKEVMTNGWFHTGDIGEWQPNGTMKIIDRKKNIFKLSQGEYVAVEHLENIYVQASAVDSIWIYGNSFESYLVAIINPNKPALEQWAEENDITANFDSLCEDSRTKTYIIGELVKIAKDKKLKGFEFIKAVNLDPVPFDMERGLMTPTFKKKRPELLKYYQSGCKIKAQNS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01011 658 CDD LC-FACS_euk 74 649 IPR045311 GO:0004467|GO:0006631
Spst3g01011 658 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Spst3g01011 658 Gene3D - 41 517 IPR042099 -
Spst3g01011 658 Pfam AMP-binding enzyme 51 525 IPR000873 -
Spst3g01011 658 SUPERFAMILY Acetyl-CoA synthetase-like 42 649 - -
Spst3g01011 658 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01011 Spst-Chr3 13504892 13512476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01011 3 649 Acyl Lipid Metabolism Gene Families AT4G23850 71.716 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01011 K01897 - gmx:100811306 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00238 2 1836711 1844936 Spst3g01011 3 13504892 13512476 PCT