Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00238 ATGGCACAGAAGAGATTCATCATTGAGGTCGAGAAAGCGAAGGAAGCGAGCGAAGGAAGGCCATCGAGGGGCCCTGTGTACCGTAGCCTCTTCGCTAAGGATGGATTCCCTGCTCCTATCGAAGGTCTCGATTGCTGCTGGGACGTTTTCCGAATGTCTGTTGAGAAATATCCAACAAGTCCAATGCTTGGTCGCCGGGAGATTGTGGACGGGAAGCCAGGCAAGTACAAGTGGCTAACATACAAAGAAGTACATGACCTGGTGATTAAAGTTGGGAATTCCATCCGTAGCTGTGGTTATGGAGAAGGTGTAAAATGTGGTATTTATGGTGCCAATTCTGCAGAATGGATTATGAGCATGGAGGCCTGCAACGCTCATGGACTTTATTGTGTTCCTTTATATGATACCTTGGGTGCTGGAGCTGTAGAGTTTATTATATGTCATGCAGAGGTCTCAATCGCATTTGCAGAAGAAAAGAAGATACCGGAGGGTCAAAATCAGAGTTATGATCTTCCTATAAAGAGAAGAAGTGACATCTGTACAATAATGTATACTAGCGGAACTACTGGTGACCCCAAGGGAGTGTTGATATCAAATGAGAGTATTATTACTTTACTAGCTGGGGTTAAGCGACTGTTGGACAGTGTCAATGAACAATTGACTGAGAAGGATGTATACATATCATACCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAGGAAACATTCATATGGCATGGTGCTTCAATAGGTTTCTGGCGTGGGGATGTCAAATTGTTAATTGAAGATATTGGGGAACTAAAACCAACTATTTTCTGTGCTGTTCCTCGGGTGCTTGATAGAGTGTACTCAGGTTTGACACAAAAGATTTCTTCTGGGGGCTTCTTGAAGAAGACATTATTCAACGTTGCTTATTCACATAAGCTGAATAACATGAAGAAAGGGCTTACACATGGAGAGGCATCCCCTATTTGTGATAAATTTGTATTTGAGAAGGTAAAGCAGGGTTTAGGGGGTAGAGTTCGTCTTATTCTGTCTGGAGCAGCACCTTTATCTGCACACGTGGAAGCTTATTTAAGGGTGGTGACTTGTGCTCATGTCCTACAAGGATATGGCCTGACTGAGACCTGTGCGGGAACCTTTGTCTCATTACCAAATGAAATGGAAATGCTTGGAACAGTGGGCCCACCAGTACCAAATGTTGATGTTTGCCTGGAATCTGTTCCTGAAATGGGATATGATGCCCTGGCGAGCACACCAAGAGGAGAAATTTGTGTAAAGGGTAAAACCTTGTTTTCAGGGTACTACAAACGTGAAGACCTCACGAAAGAGGTTCTGATCGATGAATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATTGATAGGAAGAAGAATATATTTAAACTTTCGCAAGGAGAATATGTTGCTGTCGAAAACCTGGAGAACATTTATGGTCAAGTTTCATGTATTGAATCTATATGGGTTTATGGAAACAGTTTTGAGTCCTTCCTTGTTGCTGTTGTTAACCCCAGTAAGCAAGCACTTGAACATTGGGCACAAGAAAATGGTATATCTATGGACTTCAATTCTCTATGTGAAGATGCTAGAGCAAAAAGTTACATAATTGAAGAGCTTTCAAAGATTGGAAAGGCAAATAAGTTGAAAGGTTTCGAGTTTATAAGAGGAGTTCATCTTGACCCAATTCCATTTGACATGGAGCGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCACAGTTGCTTAAATTTTATCAGAGTGTCATTGACAACATGTACAAGAGTGCAAAGTAA 1842 0.4186 MAQKRFIIEVEKAKEASEGRPSRGPVYRSLFAKDGFPAPIEGLDCCWDVFRMSVEKYPTSPMLGRREIVDGKPGKYKWLTYKEVHDLVIKVGNSIRSCGYGEGVKCGIYGANSAEWIMSMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVSIAFAEEKKIPEGQNQSYDLPIKRRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLDSVNEQLTEKDVYISYLPLAHIFDRVIEETFIWHGASIGFWRGDVKLLIEDIGELKPTIFCAVPRVLDRVYSGLTQKISSGGFLKKTLFNVAYSHKLNNMKKGLTHGEASPICDKFVFEKVKQGLGGRVRLILSGAAPLSAHVEAYLRVVTCAHVLQGYGLTETCAGTFVSLPNEMEMLGTVGPPVPNVDVCLESVPEMGYDALASTPRGEICVKGKTLFSGYYKREDLTKEVLIDEWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYGQVSCIESIWVYGNSFESFLVAVVNPSKQALEHWAQENGISMDFNSLCEDARAKSYIIEELSKIGKANKLKGFEFIRGVHLDPIPFDMERDLITPTYKKKRPQLLKFYQSVIDNMYKSAK 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00238 613 Pfam AMP-binding enzyme 58 479 IPR000873 -
Spst2g00238 613 ProSitePatterns Putative AMP-binding domain signature. 182 193 IPR020845 -
Spst2g00238 613 Gene3D - 41 471 IPR042099 -
Spst2g00238 613 CDD LC-FACS_euk 74 610 IPR045311 GO:0004467|GO:0006631
Spst2g00238 613 SUPERFAMILY Acetyl-CoA synthetase-like 43 610 - -
Spst2g00238 613 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 167 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00238 Spst-Chr2 1836711 1844936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00238 3 611 Acyl Lipid Metabolism Gene Families AT4G23850 71.101 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00238 K01897 - gmx:100814965 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00238 2 1836711 1844936 Spst2g00238 2 1836711 1844936 ECH
Spst2g00238 2 1836711 1844936 Spst3g01011 3 13504892 13512476 PCT