Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01009 ATGATTCTTGATCTCAACGTCTTGGTGTTCAAGTTTCATGTTTTGAAGTCTACACTACCAATCCACAATAGAAGTCGTTCTGTTGCCAATCCCCAAAGATTGGATATGGATGTTACCTGTGCGTGTGAATGTGTGTCAATGAACTTTTGTTATTGTACATGTCAGGGCTGGCACCTAGGTCATATTCCTATTATTTGCTGGAATGACCTTCGCTGCTTACTGGGCAAAACTGCAAAACTGAAAGTAAATTTCATGGATGATGGTCCTCCGAAACTGAAAATCATCCCTGATCATTTTCAAGTTCCAACATCAAGTTTAGAATCTCCCGAGAGCAGAACATCTATTACAGAACCTGGAACTGATCAATCTTCAAGGTCCTCACACCAACAACGGACTTGGGGGAAATTAAGGACAGCTTTCATGTTGAACTTGTTTTCTCCTCGGCGACTGTCATGGGGTTCCAGTTCTGGAGGTCAGGAAAAGGTTGAGCTAACAGCTGCAGAAGTAGAATCACTTCGATCAGAGCTTGCTGATATAGAGGAGAGGGAAGCTCACTTGAAAGCTCAGTTGGAGCATATTGATGAAGTTTTGCGGTCTGCACGTCTATCTGGATATTTATACATTCGAACTAGATGGGCATCACTGCCTGGAGAACCTCCACCTATAGATGATACTGAAGTAGATGATCGGCTTTCTCGTTTTGTCGTTCTCCACGGACCATGTATATTTTTATATTTATTGTGTACAGATCTAAGCCCCCAGGACTCGACCCTTCTATCTGATATTATTGAAGTAGGGAGTTTACCATGTTTTAAGCAAGAAGATGATGAAATTCATTTTGCCTTTTATATTTTAACTCGTCATGGATTGCGATATGAATGCTCAAGCAATTCTAAGATACAGGTGGACTCTTGGTTATCTGCTTTACAAAGCGAATGCAAATTGGAATCTGATACATTTTGTAAAGCTGACTGCAAACTGGAATCTGATACTTCAATTCCCAATTGTTCAACTGAGATCTAA 1023 0.4066 MILDLNVLVFKFHVLKSTLPIHNRSRSVANPQRLDMDVTCACECVSMNFCYCTCQGWHLGHIPIICWNDLRCLLGKTAKLKVNFMDDGPPKLKIIPDHFQVPTSSLESPESRTSITEPGTDQSSRSSHQQRTWGKLRTAFMLNLFSPRRLSWGSSSGGQEKVELTAAEVESLRSELADIEEREAHLKAQLEHIDEVLRSARLSGYLYIRTRWASLPGEPPPIDDTEVDDRLSRFVVLHGPCIFLYLLCTDLSPQDSTLLSDIIEVGSLPCFKQEDDEIHFAFYILTRHGLRYECSSNSKIQVDSWLSALQSECKLESDTFCKADCKLESDTSIPNCSTEI 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01009 340 SUPERFAMILY PH domain-like 194 313 - -
Spst3g01009 340 PANTHER OS05G0595500 PROTEIN 73 331 - -
Spst3g01009 340 Coils Coil 162 196 - -
Spst3g01009 340 MobiDBLite consensus disorder prediction 102 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01009 Spst-Chr3 13486487 13489980 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01009 - - gmx:113002366 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01009 3 13486487 13489980 Spst3g01009 3 13486487 13489980 ECH
Spst2g00236 2 1807611 1809259 Spst3g01009 3 13486487 13489980 PCT