Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00236 ATGGTAGTTTCCATGTTGAAATTGTTTACTCTTCGGAGGCTGTCATGGATCTCCAGTAGTGGTGGTCAGGAAAAGGTTTTGCTAACTGCTGCTGAAGTAGAGTCTCTTCGATCAGAACTTGCTGATATAGAAGAGAGGGAAGCTCAATTGAAAGCTCGGTTGGAAAATATTGATGAAACCTTGCGGTCAGCTCGTCTATCTGGCTATTTGTACATTCGAAAAAGATGGGCTACACTTCCAGGAGAACCTCTACCTCTAGATGATACTGACATAGATGATTGGCTTCCTCGCTTTGTTGTTCTTCATGGTGCATGTCTATACTTGTATTTATTGTGTACAGATCTAAGTCCTCATGACTCAACGCTTCTATCTGATATTGTTGAAGTAGACCAACTACCGAGTTTTAAGCGGGAAGATGATGAGACACGACACGCCTTTTATATTTTAACTCGTCACGGTTTACGATATGAATGCTCAAGCAGTTCTAAAATACAGGTGGACTCGTGGTTATCAGCTTTACACTCTGATTGCAAATTGGAATCTGATACATCAACGCCCAATGTTCCAATAGATTTGTAA 579 0.4093 MVVSMLKLFTLRRLSWISSSGGQEKVLLTAAEVESLRSELADIEEREAQLKARLENIDETLRSARLSGYLYIRKRWATLPGEPLPLDDTDIDDWLPRFVVLHGACLYLYLLCTDLSPHDSTLLSDIVEVDQLPSFKREDDETRHAFYILTRHGLRYECSSSSKIQVDSWLSALHSDCKLESDTSTPNVPIDL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00236 192 Gene3D - 58 185 IPR011993 -
Spst2g00236 192 SUPERFAMILY PH domain-like 57 174 - -
Spst2g00236 192 Coils Coil 26 60 - -
Spst2g00236 192 ProSiteProfiles PH domain profile. 63 178 IPR001849 -
Spst2g00236 192 SMART PH_update 64 180 IPR001849 -
Spst2g00236 192 PANTHER OS05G0595500 PROTEIN 4 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00236 Spst-Chr2 1807611 1809259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00236 - - gmx:100803809 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00236 2 1807611 1809259 Spst3g01009 3 13486487 13489980 PCT