Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01000 ATGGAATCTGAGAGGGAAAGTTTTGACCTCTCAGGACCTTTGCATCTAACTCATGTCGTATGGGATAAAGCGCATCATCGAACGTCAGTCGCTGCTAGTTTGGTCCAAGGTGTGTACATTCTAGAAAGGGACAGGCAAGAAAAACGTGAAGGTCCAAATGCCCTTGCACCACCTTGGTGGACATTCTTTCAGTTTCAGCTGCTCCGTCAACTTGTAGACGATGTTGATTCTTCCATCTTTGGTGCAATATATGAGTTCAGGCCCTCATCATCTCAGTATAATGACACTTTATATAAAAGTCCACGGTATGTGATTGCCTTTAGAGGAACTCTAACCAAATCACACTCAGTTTCACGTGATATCGAGTTGGATATCCACTTGATCAAACATGGGCTTCATCAAACTTCTCGCTCTGAAATAGCTATAAAGGCTGTTCGAAACATGGTAGCAACTGTAGGTGATTCAAATGTTTGGTTGGCTGGACACTCCCTAGGATCAGCAATGGCGATGCTCACTGGAAAAACAATGGCCAAGAATGGCATGTTTATTGAATCTTTTCTTTTCAACCCGCCATTTGTATCTGCTCCAATTGAGAGAATTAAGGATGAGAGGGTGAAACATGGGATTCGATTTGCGGGCAGTGTGATAACTGCTGGACTCACCATTGCTATGCAAGCCAAGAAGCCCAAAGATTTATCTATTGATCCATTTGCTGCTTTGACTGCTTGGGTTCCAGGTTTGTTTGTGAATCCATCTGATCATATCTGCTCAGAGTATATTGGGTACTTTGAACATAGAAGAAGAATGGAAGAGATTGGAGCAGGAGGCATTGAAAGGTTGGCAACTCAAAATTCACTTGGTGGCCTATTGATGAGTGCATTTGGGAAGGAATCTGAGCCCCTCCACCTCATTCCTTCAGCTTCGCTCACAGTAAACATTACTCCTTCGCGTGATTTTAAAGAAGCTCACGGGATTCACCAGTGGTGGAAAGCTGACTTGCAGGTAGAACACAAGCTCTACAATTACAAGTAG 1032 0.4351 MESERESFDLSGPLHLTHVVWDKAHHRTSVAASLVQGVYILERDRQEKREGPNALAPPWWTFFQFQLLRQLVDDVDSSIFGAIYEFRPSSSQYNDTLYKSPRYVIAFRGTLTKSHSVSRDIELDIHLIKHGLHQTSRSEIAIKAVRNMVATVGDSNVWLAGHSLGSAMAMLTGKTMAKNGMFIESFLFNPPFVSAPIERIKDERVKHGIRFAGSVITAGLTIAMQAKKPKDLSIDPFAALTAWVPGLFVNPSDHICSEYIGYFEHRRRMEEIGAGGIERLATQNSLGGLLMSAFGKESEPLHLIPSASLTVNITPSRDFKEAHGIHQWWKADLQVEHKLYNYK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01000 343 Gene3D alpha/beta hydrolase 60 206 IPR029058 -
Spst3g01000 343 SUPERFAMILY alpha/beta-Hydrolases 48 199 IPR029058 -
Spst3g01000 343 Pfam Lipase (class 3) 132 182 IPR002921 GO:0006629
Spst3g01000 343 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01000 Spst-Chr3 13400260 13402199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01000 1 275 Acyl Lipid Metabolism Gene Families AT2G05260 57.895 3.36e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01000 - - gmx:100812620 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00227 2 1716263 1720742 Spst3g01000 3 13400260 13402199 PCT