Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00227 ATGGCGTCTGACAAGAACCGTTTTGATCGCACTGGACCCTTACATTTAACTTATGTTGACTGGGATAATGCGCATCATCGAAGATCAGTTGCTGCTAGTTTGGTCCATGGTGTTTATATTTTAGAGGAGGACAGGCAAGAACGTCGTGAAGGTCCCAATGCTCTTGCAGTGCCTTGGTGGACGTTCTTCCACTTTCAGTTGCTTCGTAGACTTGATGATGTTGATTCTTCCATCTTCGGTGCAATTTATGAGTTCAAGCCTTCAACATCTATGTGCAATGAAACCTTATTATGCAGAAGTCCACGTTATGTAATTGCCTTTCGAGGGACTATGGCCAAGGCACACTCAGTTTCTCGTGACATTGAGTTGGATATCCACGTTCTGCGAAATAGCCTTCATCAGACATCACGCTCTGAGATAGCAATCCAAGCTGTTCGAAACATGGTGGCTACTGTGGGTGCTTCCAATATCTGGTTAACAGGCCACTCACTAGGATCAGCAATGGCAATGCTCATTGGGAAAACCATGGCCAAGACTGGCGTATTTATTCAGTCTTTTCTCTTCAATCCTCCATATGTATCTGGTCAAACTGAGAGAATTAAGGATGTGAAATTGAAACATAGAGTTCGATTTGCTGGCAGTATAGTAACAGCAGGACTTGCCATTGTTTTCAAGGCTAAGCAGAAGAAGAGTTTGTCCTTTGATTCATTTGCTGCTTTGTCGGCCTGGGTTCCATGCTTATTTGTGAATCCATCTGACTATATCTGCTCTGAGTATATTGGATACTTTGAGCACAGAAGAAAAATGGGGGATATTGGTGCAGGGAGCATTGAGAAGTTAGCCACCCAAACCTCCCTTGGTTGTCTAGTGATGGAGAAGCTCATCGGATTCACCAATGGTGGAAACCCGACTTACTCCTGGAATCCAAGCTCTACCAATACTAAGAATTCTGGTAGTTGTTGTAATATATTGCTTGGTGGGTCTGTTTTGAGTCATGCTATCTCTGGTTTTCTATGTGAAGTTGATGTTTTAAACTATGTTATCTCTGGTTTTGGTGTAATGGCTTCTGAGAGGGAATATTTTGACCGCTCTGGACCCTTACATTTAACTTATGTTGACTGGAATAATGCATATCATCGAAAGTCAGTTGCTGCTAGTTTGGTCCAAGGTGTTTATGTTCTAGAGAAGGACAGACAACAACGGCGAGAAGGTCCCAATGCTCTTGCACTGCCTTGGTGGACGTTCTTCCACTTTCAGTTGCTTCATACGCTTGTTGATGATGTTGATTCTTCCATTTTTGGAGCAATATATGCGTTCAAGCCTCCAACATCTATGTGCACCTTACGCAGAAGTACATGTTATGTAATTGCCTTCCGAGGTACTATAACCAAAGCAGATTCAGTTTACCGTGACATTGAGTTGGATATGCATTTTGTGAGAAATGGACTTCATCAAACATCACGCTCTGAGATAGCTATCCAAGCTGTTCGAAACATAGTGGCTACTGTTGGTGCTTCCAATATCTGGTTAGCCGGCCACTCACTAGGATCAGCAATGGCCATGCTCGCTGGGAAAACCATGGCCAAGACAGGCATATTTATTGAGTCTTTTCTCTTCAACCCTCCATATCTATCTGCTCCAATTGAGAGAATTAAGGATAAGAAATTGAAACATGGGCTTCGATTTGCTGGCAGTGTAGTAACAGCTGGACTTGCCATTGCTATGAAGGCTAAGCAAAAGAAGAGTTTGTCCTTTGATCCATTTGCTGCTTTGTCTGCCTGGATTCCATGCTTATTTGTGAATCCCTCTGACCATATCTGCTCTGAGTATATTGGATACTTTGAGCACAGAAAAAAAATGGAGGAGATTGGTGCAGGAAGCATTGAAAAGTTAGCCACCCAAACGTCCCTTGGTTGTCTAGTGATGGGTGCGTTGGGAAAGGAATCTGATGAACCTCTACACCTTATTCCTTCTGCATCTCTAACGGTTAATCATACTCCTTCACGAGATTTCATAGAATCTCATGGGATTCACCAATGGTGGAAACCCGACTTACGCCTGGAATCCAAGCTCTACCAATACTAA 2085 0.4307 MASDKNRFDRTGPLHLTYVDWDNAHHRRSVAASLVHGVYILEEDRQERREGPNALAVPWWTFFHFQLLRRLDDVDSSIFGAIYEFKPSTSMCNETLLCRSPRYVIAFRGTMAKAHSVSRDIELDIHVLRNSLHQTSRSEIAIQAVRNMVATVGASNIWLTGHSLGSAMAMLIGKTMAKTGVFIQSFLFNPPYVSGQTERIKDVKLKHRVRFAGSIVTAGLAIVFKAKQKKSLSFDSFAALSAWVPCLFVNPSDYICSEYIGYFEHRRKMGDIGAGSIEKLATQTSLGCLVMEKLIGFTNGGNPTYSWNPSSTNTKNSGSCCNILLGGSVLSHAISGFLCEVDVLNYVISGFGVMASEREYFDRSGPLHLTYVDWNNAYHRKSVAASLVQGVYVLEKDRQQRREGPNALALPWWTFFHFQLLHTLVDDVDSSIFGAIYAFKPPTSMCTLRRSTCYVIAFRGTITKADSVYRDIELDMHFVRNGLHQTSRSEIAIQAVRNIVATVGASNIWLAGHSLGSAMAMLAGKTMAKTGIFIESFLFNPPYLSAPIERIKDKKLKHGLRFAGSVVTAGLAIAMKAKQKKSLSFDPFAALSAWIPCLFVNPSDHICSEYIGYFEHRKKMEEIGAGSIEKLATQTSLGCLVMGALGKESDEPLHLIPSASLTVNHTPSRDFIESHGIHQWWKPDLRLESKLYQY 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00227 694 Gene3D alpha/beta hydrolase 387 559 IPR029058 -
Spst2g00227 694 Gene3D alpha/beta hydrolase 69 210 IPR029058 -
Spst2g00227 694 Pfam Lipase (class 3) 489 531 IPR002921 GO:0006629
Spst2g00227 694 Pfam Lipase (class 3) 133 184 IPR002921 GO:0006629
Spst2g00227 694 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 358 693 - -
Spst2g00227 694 SUPERFAMILY alpha/beta-Hydrolases 371 557 IPR029058 -
Spst2g00227 694 SUPERFAMILY alpha/beta-Hydrolases 58 196 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00227 Spst-Chr2 1716263 1720742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00227 354 627 Acyl Lipid Metabolism Gene Families AT2G05260 57.394 2.21e-113 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00227 - - gmx:100786952 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00227 2 1716263 1720742 Spst2g00227 2 1716263 1720742 ECH
Spst2g00227 2 1716263 1720742 Spst3g01000 3 13400260 13402199 PCT