Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00999 ATGCAGGCCGCGGCGGCCGGAGCCGTCCCGCCCCCCATCGCGCCGAGGCCGAAGCGGCCGCGTCCGCCGTCGGGGCGCACCAACCTCGCTTCCTGCGTGGTCGCCACCATCTTTCTAATCTTTCTCATCATCGTTATCCTCATTGTGTACTACACCGTGTTCAAACCCCAGGACCCCAAGATCGCCGTCAACGCCGTCCAGCTCCCCTCATTCTCTGTCGTTAACGGCACCGTCAACTTCACGTTCTCCCAATACGCCTCCGTCCGGAACCCTAACCGTGCCGCATTCTCCCACTACGACAGCTCCCTCCAGCTCCTCTACTCCGGCAGCCAGGTCGGGTTCATGTTCATCCCCGCCGGCGAGATCGACGCCGGCCGGACGCAGTACATGGCCGCCACCTTCTCCGTCCAGTCCTTCCCCCTCTCGGCGCCCGCCAGGGTAGGCCCCACTCTCGCGAACGGCGACGGAGTGGCCTTCAACTATGGGCTTAGGATTGAGCCCACTATGGAAATCGAGTCCAAGTTGGAGATGGCGGGCCGCGTCAAAGTGTTGCACTTCTTCACCCATCACGTTTACGCCAAAGCCGGTTGCAGAGTCGCCATTGCCGTAACTGATGGATCCGTGTTAGGTTTTCACTGCTAA 642 0.6153 MQAAAAGAVPPPIAPRPKRPRPPSGRTNLASCVVATIFLIFLIIVILIVYYTVFKPQDPKIAVNAVQLPSFSVVNGTVNFTFSQYASVRNPNRAAFSHYDSSLQLLYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLSAPARVGPTLANGDGVAFNYGLRIEPTMEIESKLEMAGRVKVLHFFTHHVYAKAGCRVAIAVTDGSVLGFHC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00999 213 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 21 204 - -
Spst3g00999 213 Pfam Late embryogenesis abundant protein 87 191 IPR004864 -
Spst3g00999 213 SUPERFAMILY LEA14-like 40 157 - -
Spst3g00999 213 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00999 Spst-Chr3 13396952 13398142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00999 - - vra:106767456 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00226 2 1713438 1713989 Spst3g00999 3 13396952 13398142 PCT