Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00226 ATGGCGAAGCCCGAGAACCGTACGAACCTGGCGTCCTGTTTCGTGGCCACCATTTTCCTGATCTTCCTCCTCATCGTGGTCTTAATAGTTTACTTCACGCTGTTCAAGCCCCAGGACCCCAAAATCGCCGTCAGCTCTGTCCAGATCCCTTCCTTCTCAGCCACTAACGGCACCGTCGACTTCACCTTCTCCCAGTACGCCTCCGTCCGCAACCCTAACCGAGGCACCTTCTCCCACTACGACAGCTCGCTCCAGCTGCTCTACCACGGCACACAGGTCGGCTTCATGTTCGTCCCAGCCGGCGAGATCGCCGCCGGCAGGACTCAGTACATGGTCGCCACGTTTACCGTCCAGTCCCTCCCCTTGGGCCCGGGACCCACCTCCGTGAATGGGCCTAGCAGTGTAGGGCCCACGCTGGAGATGGAGTCGAAGATAGAGATGGGTGGGCGCGTGCGGGTGTTGCACCTTTTCAGCCACCACGTGGAGGCCAAAGCTCACTGCAGGGTCGCCATCGCCCTCACCGATGGATCCGTGTTAGGCTTTCATTGTTAA 552 0.596 MAKPENRTNLASCFVATIFLIFLLIVVLIVYFTLFKPQDPKIAVSSVQIPSFSATNGTVDFTFSQYASVRNPNRGTFSHYDSSLQLLYHGTQVGFMFVPAGEIAAGRTQYMVATFTVQSLPLGPGPTSVNGPSSVGPTLEMESKIEMGGRVRVLHLFSHHVEAKAHCRVAIALTDGSVLGFHC 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00226 183 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 174 - -
Spst2g00226 183 Pfam Late embryogenesis abundant protein 68 167 IPR004864 -
Spst2g00226 183 SUPERFAMILY LEA14-like 20 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00226 Spst-Chr2 1713438 1713989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00226 - - gmx:100820289 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00226 2 1713438 1713989 Spst2g00226 2 1713438 1713989 ECH
Spst2g00226 2 1713438 1713989 Spst3g00999 3 13396952 13398142 PCT