Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02423 ATGGCCTCCAATGCTCTTCCTCCCACCGGCAACGGCCTCATCGTCAGCTTCGGCGAGATGCTCATCGACTTCATCCCTACAGTCTCCGGCGTCTCCCTTGCCGAGGCTCCGGGTTTCCTCAAGGCCCCTGGTGGCGCCCCAGCCAACGTCGCCATTGCCGTTACAAGACTCGGCGGCAAGGCCGCTTTCATCGGCAAACTCGGCGACGACGAGTTCGGCCACATGCTGGCCAAAATCCTCAAGGACAACGACGTGAGATCCGACGGGATCAACTTCGACCAGAGCGCGCGCACAGCGCTTGCGTTCGTGACCCTACGCGCCGACGGAGAGCGTGAGTTCATGTTCTACAGAAATCCCAGCGCCGACATGCGCCTTGAGCCCGAACATCTCAATCTCGAACTCATCAGATCTGCAAAAATATTTCATTATGGATCGATAAGTTTGATCGTGGATCCATGCAGATCAGCACACCTGAAGGCAATGGAAGTTGCCAGGGAAGCAGGGTGTCTGCTCTCGTATGATCCAAACCTGAGGCTACCCTTGTGGCCATCGCCTGAGGAAGCGCGTCAGCAAATACTCAGCATATGGGACCAGTCTGATGTGATCAAGGTCAGTGATGTGGATCTGGAATTCCTAACTGGAAGTGACAAAATTGATGATGCATCTGCTCTCTCACTGTGGCGCCCAAATTTGAAGTTGCTCCTTGTCACTCTTGGCGAACGTGGTTCTAGGTACTATACCAAGAATTTCCATGGATCAGTGGACAGTTTTCATGTGAACACAGTTGATACAACTGGCGCTGGCGATTCCTTTGTTGGTGCTCTATTATGCAAGATCGTCGATGATCAATCCATACTTGAAGATGAAGCAAGGTTAAGGGAAGTAGTCAAGTTTGCAAATGCGTGTGGGGCAATTACAACAACTGGAAAGGGAGCAATTCCCACTCTTCCCACAGAGGCTGATGCCCTCCACCTGATCAACGAGGGATAG 990 0.5253 MASNALPPTGNGLIVSFGEMLIDFIPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKAAFIGKLGDDEFGHMLAKILKDNDVRSDGINFDQSARTALAFVTLRADGEREFMFYRNPSADMRLEPEHLNLELIRSAKIFHYGSISLIVDPCRSAHLKAMEVAREAGCLLSYDPNLRLPLWPSPEEARQQILSIWDQSDVIKVSDVDLEFLTGSDKIDDASALSLWRPNLKLLLVTLGERGSRYYTKNFHGSVDSFHVNTVDTTGAGDSFVGALLCKIVDDQSILEDEARLREVVKFANACGAITTTGKGAIPTLPTEADALHLINEG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02423 329 PRINTS Ribokinase signature 234 245 IPR002139 GO:0016301
Spst2g02423 329 PRINTS Ribokinase signature 39 58 IPR002139 GO:0016301
Spst2g02423 329 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 44 68 IPR002173 GO:0016301
Spst2g02423 329 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 263 276 IPR002173 GO:0016301
Spst2g02423 329 SUPERFAMILY Ribokinase-like 14 323 IPR029056 -
Spst2g02423 329 CDD bac_FRK 13 313 - -
Spst2g02423 329 Gene3D - 12 329 IPR029056 -
Spst2g02423 329 PANTHER HEXOKINASE FAMILY MEMBER 13 323 - -
Spst2g02423 329 Pfam pfkB family carbohydrate kinase 13 318 IPR011611 -
Spst2g02423 329 FunFam Probable fructokinase-2 11 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02423 Spst-Chr2 23931279 23933009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02423 K00847 - gmx:100780082 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00342 5 2850954 2853776 Spst2g02423 2 23931279 23933009 PCT