Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02377 ATGTGGGCCAGCACACAGAATGAAAGCCTGAAGCAGAAAATGTCATCTCTTGTTGCTGGCCTGTCTGATTGTCAGGAGAAAATAGGAACTGGATATCTATCTGCATTTCCATCTGAGTTGTTTGATCGATTTGAAGCTGTTCAACCTGTTTGGGCTCCCTATTATACTATTCACAAGATTTTGGCTGGCCTCTTGGATCAACATACATTTGCTGGAAACCCTCAAGCTCTAAAAATGACAACATGGATGGTTGATTACTTCTACAACAGAGTACAGAATGTAATAACAAAGTACACTATAAATAGACACTATCAATCACTGAACGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGATTATACAGTATAACAGGAGATTCCAAGCATCTGTTGTTGGCTCACCTTTTTGACAAACCGTGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAACGACATTGCTGATTTTCATGCTAATACACATATTCCAGTTGTTGTTGGATCTCAAATGCGGTATGAAATCACAGGAGATCCACTTTATAAGGCAATTGGGACATTCTTTATGGACCTCATAAACTCTTCTCACAGCTATGCAACAGGAGGGACATCAGTCAGCGAGTTTTGGAGTAATCCAAAGAGAATAGCGGACAACTTAAGAACGACAGAAAATGAAGAATCGTGCACCACTTATAATATGTTGAAGGTTTCACGCCACCTCTTTAAATGGACCAAAGAAGTCTCTTATGCAGACTATTATGAGCGTGCCTTGACCAATGGAGTGCTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTACATGCTTCCACTAGGTCCTGGGGTTTCCAAGGCTAAAACTGGACATAGTTGGGGAACACCGTTTGACTCTTTCTGGTGCTGCTATGGAACAGGAATTGAATCATTCTCCAAGCTGGGGGATTCTATCTATTTTGAAGAGGAAGGGAAAGATCCTGCACTTTACATCATTCAGTACATATCAAGCTCGTTTAACTGGAAATCTGGCAAAATTTTGCTCAATCAAACAGTTGTTCCAGCTGCTTCATGGGATCCTTACCTACGAGTGACATTTACGTTTGCTCCTGTAGAGAGTAAGCGTCCTCATGATCTGGGAAAGATTTGGTCTGTTTCTGTTGTTCTAAACCCTTCTGCACTAATGATTTCACTTTTCAATGTACCCTATACTGCTTTAGTGCCTCAGCATGTGAAACATCGTGTCATGTTGGCTTCTAGTGGTGTATTCGATTTTGGATTAGTCCCCGGCCTGCAAACAGAACTTGGTGGTGAAGGCCTATTGAGTTCTTCGTCTACATTGAACTTTCGACTACCAAGTTGGACTCGTCTGGATGGTGCCAAGGGCATACTAAATGGTGAATCTTTATCGCTGCTAACTCCAGGAAGTTTTTTGTCAATCACTAGACAATGGAGTGCTAATGACAAGCTCACCCTTCAGCTGCCCCTTACCGTAAGAACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTGTTCAGGCGATTCTGTATGGTCCCTATCTTCTTGCGGGTCATGCAACTGGTCGTGATTGGTACCTTAAAGCTGGAACAAACGATGCAGACTGGATTACTCCTGTTCCTGCCAGTTACAATAGTCAACTAGTTTCTTTTTACCAAGACTTTGAAAAATCAACTTTTGTGTTGGCAAATTCAAACCAATCATTTGCAATGCAAGAGTTGCCTGAATCTGGCACTGATGTGGATCCTAGGGCAACCTTTAGGCTCGTCCTAAAAGAATCTTCCTCAATGTTTTCAACATTGGCAGATGCTAATGATAGATCACTGATGCTAGAACCATTTGATCTCCCTGGAATGAATGTGATTCACCAAGGAGCAGACAAACCTCTTGTCATAGTAGATTCTTCCCTTGGGGGCCCATCTTCTGTTTTTCTTGTGGTACCAGGGTTGGATGGAAGAAATGAAACCATATCTTTAGAATCGCAGAGCAACAAGGGCTGTTATGTGTATAGTGATTTGAGCTCTAGTGCAGGAGTCAAGCTCAGTTGCAAATCCAATTCTGACGCTTCTTTTAACCAAGCAACAAGCTTTGTTGCTCGGGAAGGATTGAGCCAATACAATCCAATCAGTTTTGTGGCTAAAGGGGTAAACAGGAATTATCTTTTGCAGCCATTACTCACATTTAGAGATGAGCCTTACACAGTTTATTTTAATATTCAAGATTCATAG 2244 0.4184 MWASTQNESLKQKMSSLVAGLSDCQEKIGTGYLSAFPSELFDRFEAVQPVWAPYYTIHKILAGLLDQHTFAGNPQALKMTTWMVDYFYNRVQNVITKYTINRHYQSLNEETGGMNDVLYRLYSITGDSKHLLLAHLFDKPCFLGLLAVQANDIADFHANTHIPVVVGSQMRYEITGDPLYKAIGTFFMDLINSSHSYATGGTSVSEFWSNPKRIADNLRTTENEESCTTYNMLKVSRHLFKWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGPGVSKAKTGHSWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGKDPALYIIQYISSSFNWKSGKILLNQTVVPAASWDPYLRVTFTFAPVESKRPHDLGKIWSVSVVLNPSALMISLFNVPYTALVPQHVKHRVMLASSGVFDFGLVPGLQTELGGEGLLSSSSTLNFRLPSWTRLDGAKGILNGESLSLLTPGSFLSITRQWSANDKLTLQLPLTVRTEAIKDDRPEYASVQAILYGPYLLAGHATGRDWYLKAGTNDADWITPVPASYNSQLVSFYQDFEKSTFVLANSNQSFAMQELPESGTDVDPRATFRLVLKESSSMFSTLADANDRSLMLEPFDLPGMNVIHQGADKPLVIVDSSLGGPSSVFLVVPGLDGRNETISLESQSNKGCYVYSDLSSSAGVKLSCKSNSDASFNQATSFVAREGLSQYNPISFVAKGVNRNYLLQPLLTFRDEPYTVYFNIQDS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02377 747 SUPERFAMILY AbfB domain 614 727 IPR036195 GO:0046373|GO:0046556
Spst2g02377 747 Gene3D - 604 729 - -
Spst2g02377 747 Pfam Beta-L-arabinofuranosidase, GH127 442 522 IPR012878 -
Spst2g02377 747 Pfam Beta-L-arabinofuranosidase, GH127 1 364 IPR012878 -
Spst2g02377 747 SUPERFAMILY Six-hairpin glycosidases 53 278 IPR008928 GO:0005975
Spst2g02377 747 PANTHER PROLINE-TRNA LIGASE (DUF1680) 1 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02377 Spst-Chr2 23387679 23392926 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02377 K09955 - gmx:100791803 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00371 5 3064122 3069416 Spst2g02377 2 23387679 23392926 PCT