Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02284 ATGGCCACGAATTCTTCTAATGGAGCACCAAAGCAGCCTCCCATGCCATCTCCCTTGCGTTTTTCCAAGTTCTTTCAGTCCAATATGAGAATTCTGGTTACTGGAGGAGCTGGTTTTATTGGCTCTCACCTAGTTGACAAATTGATGGAAAATGAAAAGAATGAGGTTATTGTTGCTGACAACTTCTTCACTGGATCCAAAGACAACCTTAAAAGATGGATTGGTCATCCAAGATTCGAGTTAATTCGCCATGATGTCACAGAGCAATTGTTGATTGAGGTTGATCAAATCTATCATCTTGCATGTCCTGCTTCTCCAATTTTCTACAAATACAATCCTGTAAAGACAATAAAGACAAATGTGATTGGAACACTGAACATGCTTGGGCTTGCTAAGCGTGTGGGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTGTGCATCCCCAACCAGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTTCGGAGTTGTTATGATGAGGGCAAGCGTGTTGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGACTAGAAATACGCATTGCAAGAATCTTTAACACGTATGGACCACGCATGAATATTGATGATGGGCGTGTGGTCAGCAACTTCATTGCTCAAGCAATTCGTGGTGAACCCTTAACTGTCCAAGTTCCAGGAACTCAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGACTTATACGTCTAATGGAAGGGGAAAACACTGGTCCAATCAACATTGGGAACCCAGGCGAATTTACAATGACTGAACTAGCCGAGAATGTGAAAGAGCTTATTAATCCAGCAGTGGAGATAAAGATGGTTGAGAACACTCCTGATGATCCTCGTCAGAGAAAACCAGACATAACAAAGGCAAAGGAATTGCTGGGATGGGAACCAAAGGTCAAGTTGCGTGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTCAGAGGCTTGGGGTTCCCAAGAAAAACTAA 1029 0.4286 MATNSSNGAPKQPPMPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNFFTGSKDNLKRWIGHPRFELIRHDVTEQLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRQRLGVPKKN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02284 342 CDD UGD_SDR_e 29 333 - -
Spst2g02284 342 FunFam UDP-glucuronic acid decarboxylase 6 28 337 - -
Spst2g02284 342 Gene3D - 28 338 - -
Spst2g02284 342 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 16 337 IPR044516 GO:0042732|GO:0048040|GO:0070403
Spst2g02284 342 Pfam GDP-mannose 4,6 dehydratase 32 326 IPR016040 -
Spst2g02284 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 336 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02284 Spst-Chr2 21974831 21979185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02284 31 325 Miscellaneous Gene Families AT4G00110 24.848 2.21e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02284 K08678 - gmx:100819843 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02284 2 21974831 21979185 Spst5g00444 5 3499650 3504408 PCT