Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02283 ATGGCAGCAGCGAATTCTTCTAATGGAGATTCCGTTAAATCACCGAAGCGACCTCCCCCGCCATCTCCCTTGCGTTTCTCCAAATTCTATCAGTCTAACATGAGAATCTTGATCACGGGAGGAGCTGGATTCATTGGTTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGATAACTACTTCACTGGATCAAAGGATAACCTTAAAAAATGGATGGGGCATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAACCTTTGATTATTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCATCTCCTGTTTTTTACAAATATAATCCTGTAAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTACTTACATCAACATCCGAGGTATATGGGGATCCTCTCGAGCATCCCCAAACTGAAACCTATTGGGGAAATGTGAACCCTATCGGAGTTCGTAGTTGCTATGATGAGGGAAAGCGTGTGGCTGAGACTTTGATGTTTGACTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACTTACGGGCCACGCATGAATATTGATGATGGACGTGTTGTCAGCAACTTCCTTGCTCAAGCACTTCGTGGTGAACCCTTGACGGTCCAATCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATCTGGTCGATGGCCTTATCCGTCTCATGGGAGGATCCGACACCGGACCAATCAACATTGGAAATCCGGGTGAATTTACAATGCTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAGATTTGGAGATAAAGATAGTGGATAACACTCCTGATGATCCGCGACAGAGAAAACCAGACATAACAAAATCAAAGGAATTGCTTCACTGGGAACCAAAGGTTAAGCTGCGAGATGGCCTTACTCTTATGGAAGAGGATTTCCGTTTGAGGCTTGGAGTTGTAAAAAATAATTAA 1044 0.431 MAAANSSNGDSVKSPKRPPPPSPLRFSKFYQSNMRILITGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWMGHPRFELIRHDVTEPLIIEVDQIYHLACPASPVFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQTETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFLAQALRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINIGNPGEFTMLELAETVKELINPDLEIKIVDNTPDDPRQRKPDITKSKELLHWEPKVKLRDGLTLMEEDFRLRLGVVKNN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02283 347 Gene3D - 158 341 - -
Spst2g02283 347 Gene3D - 31 157 - -
Spst2g02283 347 CDD UGD_SDR_e 34 338 - -
Spst2g02283 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 338 IPR036291 -
Spst2g02283 347 Pfam GDP-mannose 4,6 dehydratase 37 332 IPR016040 -
Spst2g02283 347 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 22 342 IPR044516 GO:0042732|GO:0048040|GO:0070403
Spst2g02283 347 MobiDBLite consensus disorder prediction 1 24 - -
Spst2g02283 347 FunFam UDP-glucuronic acid decarboxylase 6 33 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02283 Spst-Chr2 21962400 21969802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02283 31 346 Miscellaneous Gene Families AT1G02000 23.077 1.06e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02283 K08678 - qsu:112026144 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00444 5 3499650 3504408 Spst2g02283 2 21962400 21969802 PCT