Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01526 ATGCAGACAATAAGTTCGAACAAGTTCAGAACTGGCATGGACTTCTTCCACCGCGCCAAGGCGGTTCGCCTCCGCAGCCACCACGACAAGTACCTGCTGGCGGAGGACGACGAGGAGTCGGTGACGCAGGATCGCAACGGGTCCTCGAAGAGCGCGCGCTGGGTGGTAGAATACGTCCCCGAATACGACAACATAATTCGCCTGAAGAGTTGTTACGGCAAGTACCTCACCGCCTCCAACCACCTCTTCCTGCTGGGCATGACGGGCCACAAGGTCCTACAGACCCGTCCGCAGAGGCTCGACTCCTCCGTCGAGTGGGAGCCCGTCAAGGATGGAGGCCGTGTCAAGCTCAAAACCCGTTACGGCAACTTCCTCCGAGCCAATGGGGGCTTGCCGCCATGGAGAAACTCCGTCACGCACGATATTCCGCACAGGACCGCCACGCAGGACTGGATCCTCTGGGACGTGGATGTCGTCGAGATTTATGTCAACTCTCCAGCAAATAGCAGTAAACCCTCTGCTCCACCGTTGCCTGTTTCCAACACTGTTCCCGTCCTTGCCGGCGCACCGCTGCCCCCGCCGCCATCCATGTCTGCCAGCTTTTCGAGGGAACAGTCCAATGATTCGAATGGTTCGTCGCCGAAGATGGAAGGGCGGATTATATACTACCATATTGCTGAAGATAATGGAGAGGTGCTGGATGAAAATGTGCAGGGGTATTCTTTGATTTTCAAAGGGAATGGCGTTGAAGAATTGACTCGAAAGTTTGAGGAAGAGACAGGGCTAGAGGGAATCATTGTATGTAATAGGAGTCCTTTGAATGGAAAGCTTTATCCTCTTCGCTTGCAGCTTCCTCCAAACACGGTGACCATGCGGGTTGTTTTGGTTCTTCCCATGTCAAATGTGGGAAGAGACTTTGAGGCACAAGGCTTACTGTGA 939 0.5421 MQTISSNKFRTGMDFFHRAKAVRLRSHHDKYLLAEDDEESVTQDRNGSSKSARWVVEYVPEYDNIIRLKSCYGKYLTASNHLFLLGMTGHKVLQTRPQRLDSSVEWEPVKDGGRVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTATQDWILWDVDVVEIYVNSPANSSKPSAPPLPVSNTVPVLAGAPLPPPPSMSASFSREQSNDSNGSSPKMEGRIIYYHIAEDNGEVLDENVQGYSLIFKGNGVEELTRKFEEETGLEGIIVCNRSPLNGKLYPLRLQLPPNTVTMRVVLVLPMSNVGRDFEAQGLL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01526 312 SUPERFAMILY Actin-crosslinking proteins 17 159 IPR008999 -
Spst2g01526 312 Gene3D - 21 141 - -
Spst2g01526 312 MobiDBLite consensus disorder prediction 198 214 - -
Spst2g01526 312 FunFam BnaC05g19630D protein 17 157 - -
Spst2g01526 312 MobiDBLite consensus disorder prediction 185 215 - -
Spst2g01526 312 Pfam Domain of unknown function (DUF569) 13 154 IPR007679 -
Spst2g01526 312 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 13 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01526 Spst-Chr2 13977740 13980084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01526 - - gmx:100811752 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01526 2 13977740 13980084 Spst2g01526 2 13977740 13980084 ECH
Spst2g01525 2 13969445 13970101 Spst2g01526 2 13977740 13980084 PCT