Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01525 ATGGAGTTTTTCACCAAAACCAACGTGGTGAGGCTGCGGAGCCACCTTGACAAGTATCTCGTGGCCGATGCCGATGGCAACCGCGTTCATCAGAGCCGCAAGGCCTACGGCCGGGGAGCGTGGTGGACGGTGGAGGAGATCACGGACGGAGGAACCAAAAAGGTGCGCCTGAGGAGCTACCACGGAAGGTACTTAACGGCCTCGGAGGCGCCGTTTCTGTTAGGGATGACGGGGAAGAAGGTGCTCCAGACGGAGTTGGAGCCCGGCGCGGATTTCAAGCACGAGTGGGAAGTGATACGCGACGGGTTCCAGGTGAGGTTGAAGTGTTGGAGTGGGAGGTTCCTGCGCGCGAACGGAGGGACTCCGCCGTGGCGGAACGCTGTGACGGTTGACGAGCCGCACAGTTCGGCGACTAAGGATTGGGTTCTGTGGGATGTGGAGACTGTGGAGGCGGTGGAGGAATTGGTGGATGAGTTGTGCGAGAGCGTCGTTTCGTCTCTCGCTTCCGATGATGTCTCCGTCGATTCGGAAACAGCGTCACCGATGTCGGTTTTCGCGCTCAATTCGTCGCCTGCGAGGCGGAACTCGAAGCTGATGCTACAGGTGCGTTTTGATTTTTTTGGTTTATGGACTTTTCGTTTCGCGATTTTTGCGTGA 657 0.5784 MEFFTKTNVVRLRSHLDKYLVADADGNRVHQSRKAYGRGAWWTVEEITDGGTKKVRLRSYHGRYLTASEAPFLLGMTGKKVLQTELEPGADFKHEWEVIRDGFQVRLKCWSGRFLRANGGTPPWRNAVTVDEPHSSATKDWVLWDVETVEAVEELVDELCESVVSSLASDDVSVDSETASPMSVFALNSSPARRNSKLMLQVRFDFFGLWTFRFAIFA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01525 218 Gene3D - 4 148 - -
Spst2g01525 218 Pfam Domain of unknown function (DUF569) 1 144 IPR007679 -
Spst2g01525 218 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 177 - -
Spst2g01525 218 SUPERFAMILY Actin-crosslinking proteins 7 147 IPR008999 -
Spst2g01525 218 FunFam BnaC05g19630D protein 5 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01525 Spst-Chr2 13969445 13970101 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01525 - - gmx:100811752 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01525 2 13969445 13970101 Spst2g01525 2 13969445 13970101 ECH
Spst2g01525 2 13969445 13970101 Spst2g01526 2 13977740 13980084 PCT