Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00790 ATGATATTCATAAAGGAGGAGTTTGGAATCAGCGACACCCGACAAGAAGTTCTAGCCGGCATCTTAAACCTTTGTGCATTGGTAGGTTCTTTAGCTGGAGGAAGAACGTCTGATTACTTTGGTCGACGATTCACAATCGCTCTAGCCTCTATCCTTTTCATGACGGGTTCAATTCTCATGGGATATGGTCCAAACTACGCAATTCTTATATTGGGAAGGTGTGTCGCGGGTATTGGCGTGGGTTTTGCTCTTCTGATAGCACCAGTTTATTCTGCAGAAATCTCCTCTGCTAAATCCCGAGGATTTCTAGCGTCCCTACCTGAACTTGGTATTGGTATTGGAATTTTACTTGGTTACGTTGCAAACTACTTCTTAGGGAAGTTGACTTTGAAGCTTGGGTGGAGATTGATGCTTGGTATTGCAGCAGTTCCTTCACTTGCTTTAGCTTTAGGCATTCTCATAATGCCTGAGTCTCCAAGGTGGTTGGTGATGCAAGGCCATTTGGGAAAAGCCAAGAAAGTTTTGTTACAAATTTCAAATACTGAACAAGAAGCTGAGCTTCGGTTCAAGGATATAAATATTGCAGCTGGGATAATTTACGAGAATTGCCCTGAAGTGACAGTTAAGCACCCAGAAAAGAACCGTGGTGAAGGGGTTTGGAAAGAGTTGCTTGTGAAACCCTCTTATTCTGTTCGGTGGATGCTGATTGCAGCTGTGGGGGTTCACTTTTTTCAGCATGCTACTGGAATTGAAGCTGTGATGCTATACAGTCCAAGAATCTTTAGAAAAGCAGGTGTTACCACTAAGGACAAACTCTTGCTCACAACCATTGGAGTAGGCCTTACAAAAATCTTTTTCTCGACAATAGCAACATTTTTTCTTGACAGAGTTGGGAGAAGACGCCTCTTGCTTTCAAGCACTGGAGGAATGGTTTGTAGCCTTGCAGTATTAGGATTCAGCTTGACCATGGTTCATAATTCCCAGGAAAAGCTCTTATGGGCCTTGACCCTTAGCATAGTGGCTACTTACTCGCTTGTTGCTTCTTTTAATATGGGACTTGGACCTGTCACATGGGTGTACAGCTCAGAGATTTTCCCTTTGAAGTTGAGAGCACAAGGAGTAAGTATAGGAGTTGCAGTTAACAGAGTCATGAATGCTGCTGTTGCCATGAGTTTTATTTCAATCTATAAAACACTCACCATAGGCGGAGCCTTTTTCATGTTTGCTGGTATATCTATATTGGCTTTGTTCTTCTTCTACTTTTTACTGCCTGAAACCAAGGGCAAGGCCTTGGAAGAGATGGAGATGGTTTTCAGCAAAAACTATAGTAGGAATGTAGCTGCAGAAACTGATCCGAGGCAGAATGTGTAA 1371 0.4274 MIFIKEEFGISDTRQEVLAGILNLCALVGSLAGGRTSDYFGRRFTIALASILFMTGSILMGYGPNYAILILGRCVAGIGVGFALLIAPVYSAEISSAKSRGFLASLPELGIGIGILLGYVANYFLGKLTLKLGWRLMLGIAAVPSLALALGILIMPESPRWLVMQGHLGKAKKVLLQISNTEQEAELRFKDINIAAGIIYENCPEVTVKHPEKNRGEGVWKELLVKPSYSVRWMLIAAVGVHFFQHATGIEAVMLYSPRIFRKAGVTTKDKLLLTTIGVGLTKIFFSTIATFFLDRVGRRRLLLSSTGGMVCSLAVLGFSLTMVHNSQEKLLWALTLSIVATYSLVASFNMGLGPVTWVYSSEIFPLKLRAQGVSIGVAVNRVMNAAVAMSFISIYKTLTIGGAFFMFAGISILALFFFYFLLPETKGKALEEMEMVFSKNYSRNVAAETDPRQNV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00790 456 Gene3D MFS general substrate transporter like domains 3 442 IPR036259 -
Spst2g00790 456 PRINTS Sugar transporter signature 362 374 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g00790 456 PRINTS Sugar transporter signature 245 255 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g00790 456 PRINTS Sugar transporter signature 70 89 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g00790 456 PRINTS Sugar transporter signature 339 360 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g00790 456 NCBIfam sugar porter family MFS transporter 11 434 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g00790 456 SUPERFAMILY MFS general substrate transporter 2 435 IPR036259 -
Spst2g00790 456 ProSitePatterns Sugar transport proteins signature 1. 33 50 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst2g00790 456 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 11 441 IPR045262 GO:0015144
Spst2g00790 456 ProSitePatterns Sugar transport proteins signature 2. 75 100 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst2g00790 456 Pfam Sugar (and other) transporter 11 438 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst2g00790 456 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 427 IPR020846 GO:0022857
Spst2g00790 456 FunFam probable polyol transporter 4 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00790 Spst-Chr2 6670485 6671855 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00790 2 438 Organic Solute Cotransporters AT2G18480 67.963 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00790 - - gmx:102661233 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03906 3 89124074 89126522 Spst2g00790 2 6670485 6671855 ECH
Spst2g00790 2 6670485 6671855 Spst2g00790 2 6670485 6671855 ECH