Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00615 ATGAAAACCAAAACGGTTAAGGGAAATTGGAGATGGAATTGGTGGACGAACAAGCTCGGCTTGCCTTTCGTCTTCCTTATATGCATCTTCTTCTTTGTCGCTGGATTCTTTGCTTCCAGTCTCTTCTCCCACTCTCAGGAACGTGAATATGATCCGAGGCTGATGCCGAGACCGAGAGCGAGGTTACTTGAAAAATCGATCGAGGAGGAGACGGAGTATCAGTCGTTGCAAGCTGGAGAATCCGGCGACGACTCCATTACATTGATTCCTTTTCAGGTTTTGAGTTGGTACCCTCGCGCTCTGTATTTTCCTAATTTTGCGAGTGCACAACAATGTGAAAGCATAATTGAAATGGCAAGGGTAGGACTCAAGCCATCAACATTGGCTTTGCGCAAGGGAGAAACGGAGGAGAACACAAAGGGAATCAGAACAAGCTATGGTGTTTTTATGAGTGCTACCGAGGATGAAACGGGAACTTTATATGCCATTGAGGAAAAAATAGCCAAAGCAACAAAAATTCCTAGGACTCATGGAGAGGCATTTAATATCCTACGCTATGAGATTGGACAGAAATACAATTCTCATTATGATGCATTTGATTATGCTGAATATGGTCCACAAAAGAGCCGAAGGGTAGCTTCATTTTTGCTGTATTTAAGTGATGTTCCAGAAGGTGGGGAGACCATGTTTCCGTTTGAGAATGGATTCAACATGGACGGTAGCTATGATTTTGAGGACTGTATTGGTTTAAAAGTAAGGCCACGCAAAGGGGATGGGCTTCTATTTTATTCATTATTGCCTAATGGTACAATTGATCAGACATCACTCCACGGAAGCTGTCCCGTCATAAAAGGAGAAAAATGGGTGGCAACAAAGTGGATAAGGGATCAAATACAAGACGACGATTAA 909 0.4301 MKTKTVKGNWRWNWWTNKLGLPFVFLICIFFFVAGFFASSLFSHSQEREYDPRLMPRPRARLLEKSIEEETEYQSLQAGESGDDSITLIPFQVLSWYPRALYFPNFASAQQCESIIEMARVGLKPSTLALRKGETEENTKGIRTSYGVFMSATEDETGTLYAIEEKIAKATKIPRTHGEAFNILRYEIGQKYNSHYDAFDYAEYGPQKSRRVASFLLYLSDVPEGGETMFPFENGFNMDGSYDFEDCIGLKVRPRKGDGLLFYSLLPNGTIDQTSLHGSCPVIKGEKWVATKWIRDQIQDDD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00615 302 SMART p4hc 98 295 IPR006620 GO:0005506|GO:0016705|GO:0031418
Spst2g00615 302 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 176 296 IPR005123 -
Spst2g00615 302 Pfam 2OG-Fe(II) oxygenase superfamily 182 295 IPR044862 -
Spst2g00615 302 Gene3D q2cbj1_9rhob like domain 91 295 - -
Spst2g00615 302 FunFam Prolyl 4-hydroxylase 4 90 296 - -
Spst2g00615 302 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 70 295 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00615 Spst-Chr2 5083380 5088856 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00615 K00472 - gmx:100811904 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00615 2 5083380 5088856 Spst2g00615 2 5083380 5088856 ECH
Spst2g00615 2 5083380 5088856 Spst10g01274 10 13442470 13444881 PCT