Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00351 ATGAGATGTCGGCAAAAGACAGAAAAGAGAAAAGATGGGAAAATTCTCAACTCCCTCCATCTTCAGTATAAAAGAGGGAAGAAAAAGAGGGAGAGAAACGAAGAGAAGATGGGTGCAGAAGCAAATGGCGGCGAGAGGCAACTGAAATTTATGATCTACGGTCGAACAGGTTGGATTGGTGGTTTACTGGGGAAGCTGTGCCAAGAGAGAGGCATCCAATATCACTACGGAAGCGGAAGATTGGAGAACCGATCGTCCTTGGAGGCGGACATTACGGCGGTGAACCCCACCCACGTGTTCAACGCCGCCGGAGTCACCGGTAGACCAAATGTGGACTGGTGCGAGTCTCACAAGGTTGAAACCATCCGCACCAACGTTGTGGGCACTCTCACCCTGGCCGACGTCTGCCGTCAAAAAAATCTGATTCTCATAAACTACGCCACCGGCTGCATCTTCGAGTACGACTCCTCCCACACCCTCGGATCCGCCGTCGGCTTCACGGAGGACGACACTCCCAATTTCACCGGATCCTTCTACTCCAAGACCAAGGCCATGGTGGAGGATCTACTTCGGAACTACGACAACGTGTGCACGTTGCGCGTGAGGATGCCCATTTCCTCGGATTTGTCGAACCCACGTAATTTCATCACTAAGATCAGTCGATACGACAAGGTTGTCGACATTCCGAACTCCATGACCGTACTGGACGAGCTGCTCCCGATCTCGGTGGAGATGGCGAAGAGGAATCTGACTGGGATCTGGAATTTCACGAACCCTGGAGTGGTAAGCCACAACGAGATTCTGGAGATGTACAGGGAGTACGTGGATCCTAGCTTCAGGTGGAAGAACTTCAGTGTGGAGGAGCAGGCGAAGGTTATTGTTGCCCCCCGAAGTAACAACCACCTTGACGCCTCTAAGTTGAAGAAGGAGTTTCCTCACCTTTTGTCCATCAAGGACTCTCTCCTTAACTACGTCTTTCTCCCCAATCACAAAACGCCTCCATAG 1005 0.5154 MRCRQKTEKRKDGKILNSLHLQYKRGKKKRERNEEKMGAEANGGERQLKFMIYGRTGWIGGLLGKLCQERGIQYHYGSGRLENRSSLEADITAVNPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRQKNLILINYATGCIFEYDSSHTLGSAVGFTEDDTPNFTGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLSNPRNFITKISRYDKVVDIPNSMTVLDELLPISVEMAKRNLTGIWNFTNPGVVSHNEILEMYREYVDPSFRWKNFSVEEQAKVIVAPRSNNHLDASKLKKEFPHLLSIKDSLLNYVFLPNHKTPP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00351 334 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 39 334 - -
Spst2g00351 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 48 324 IPR036291 -
Spst2g00351 334 CDD dTDP_HR_like_SDR_e 49 321 - -
Spst2g00351 334 Pfam RmlD substrate binding domain 49 219 IPR029903 -
Spst2g00351 334 Gene3D - 40 332 - -
Spst2g00351 334 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 47 332 IPR005913 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00351 Spst-Chr2 2749027 2750137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00351 K12451 - gmx:100787499 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00351 2 2749027 2750137 Spst2g00351 2 2749027 2750137 ECH
Spst3g04392 3 95545829 95546910 Spst2g00351 2 2749027 2750137 PCT