Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00338 ATGTGTCAGGTATCATCATCTACCTCCATTTTGGGTGAAACTAATGAGAGTCATCCAAGTATGGTCACAGCCAAAATTCAAGACCCTGACATCTTTGCCCTTTTGATCCCTAAAACCCCAACAACTTTCGAACAGGGCCCAAAACACCAAAAGCCCCATGAAAGCAGCCATTGTTCCCTGGCCTTCAAGGAAGCCGAATGCATGACAAAGACAGCATTACCCATGGTGCTAACTGGCCTGCTGCTCTACTCTCGCTCCATAATCTCCATGTTGTTCCTTGGTCGTGCAGGTGAGCTTGCCTTAGCTGGTGGTTCTCTCGCCATTGGATTCGCCAACATCACAGGTTACTCTATTCTCTCGGGCCTCGCCATGGGGATGGAGCCCATTTGCGGCCAGGCTTTCGGGGCCAAACGTTTCAAACTCTTGGGCTTTGCGATGCAGAGGACGATAGTCCTGCTTCTTTTAACTTCAATAGTTATATCATTCTTGTGGCTCAACATGAAGAAAATATTGCTCCTGTGTGGCCAACAAGAAGACATCGCCACCGAAGCTCAATCATTCATACTTTATTCTCTTCCTGATCTCGTCGCACAATCGTTGCTACACCCTCTGCGAATCTACTTGCGAAGTCAATCCATAACTCTGCCTCTCACATACACTGCATCGCTCTCTGTTCTTCTTCACATCCCCATCAACTACCTCCTTGTCTCTGTGTTTAAACTTGGAATCAAAGGCATTGCTTTAGGTGCTGTATGGACGAATTTCAACCTCGTATTTTCTCTGATTATCTACATCTGGGTCTCCGGCATATACAAGAAAACATGGACCCTTATTTCATTGAAGGGTATCTTCTGCGGATGGAAAGCGCTTTTGAATTTGGCAATTCCAAGTTGCATTTCCGTTTGCCTCGAATGGTGGTGGTACGAAATCATGATTATACTATGCGGGTTACTGATTAATCCACAAGCAACTGTTGCATCCATGGGGGTTCTGATTCAAACCACCGCTCTGATATACATTTTCCCATCTTCGCTCAGCTTTGCGGTTTCCACACGTGTGGGAAATGAAGTGGGTGCGGAGAATCCAAAAAAGGCCAAACTCGCAGCACACGTGGGACTTTGTTTCAGTTATGTTTTGGGATTGTCGGCCTTGTTTTTTGCTATTTCGGTAAGGCACGTGTGGGCTTCCATGTTCACACGTGACGCGGAGATCATTGCTTTGACGTCGATGGTGTTGCCCGTCATTGGGCTGTGCGAGCTTGGAAATTGTCCGCAGACAACGGTTTGCGGCGTTTTGAGGGGAACCGCGAGACCGAAGTTGGGAGCGAATATAAATTTGGGTTGCTTCTATTTTGTGGGAATGCCCATTGCCGTGTGGTTGAGTTTCTTTGCAGGGTTTGACTTCAAAGGCTTGTGGCTTGGTTTGTTGGCCGCTCAAGCCTCTTGCATGATCACCATGTTGTTCGTCTTGGCTCGCACCAATTGGGAGGATCAGGTTCGTAGAGCCAAAGAACTCACCTCCTCTCATTCTACTGAGGAGGAAGAAGAACAAGATGAGCAAGTGTTGTTGAGTTCAGGCGCCACCGAGGAATGCTCGGATTCAAATGTTTGA 1611 0.4736 MCQVSSSTSILGETNESHPSMVTAKIQDPDIFALLIPKTPTTFEQGPKHQKPHESSHCSLAFKEAECMTKTALPMVLTGLLLYSRSIISMLFLGRAGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGFAMQRTIVLLLLTSIVISFLWLNMKKILLLCGQQEDIATEAQSFILYSLPDLVAQSLLHPLRIYLRSQSITLPLTYTASLSVLLHIPINYLLVSVFKLGIKGIALGAVWTNFNLVFSLIIYIWVSGIYKKTWTLISLKGIFCGWKALLNLAIPSCISVCLEWWWYEIMIILCGLLINPQATVASMGVLIQTTALIYIFPSSLSFAVSTRVGNEVGAENPKKAKLAAHVGLCFSYVLGLSALFFAISVRHVWASMFTRDAEIIALTSMVLPVIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYFVGMPIAVWLSFFAGFDFKGLWLGLLAAQASCMITMLFVLARTNWEDQVRRAKELTSSHSTEEEEEQDEQVLLSSGATEECSDSNV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00338 536 Pfam MatE 74 234 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g00338 536 Pfam MatE 296 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g00338 536 PANTHER MULTIDRUG RESISTANCE PROTEIN 62 495 - -
Spst2g00338 536 MobiDBLite consensus disorder prediction 521 536 - -
Spst2g00338 536 MobiDBLite consensus disorder prediction 505 536 - -
Spst2g00338 536 NCBIfam MATE family efflux transporter 74 472 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g00338 536 CDD MATE_eukaryotic 64 501 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00338 Spst-Chr2 2641859 2643469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00338 K03327 - gmx:100811560 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00338 2 2641859 2643469 Spst2g00338 2 2641859 2643469 ECH
Spst3g04407 3 95646705 95648363 Spst2g00338 2 2641859 2643469 PCT