Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00302 ATGGTGAATCGTCGACGCTTGAGTCGGGTGGCGACGAGCGATGACGAAGACGAAGTACCGCTCCCCCAACGCACGCGGAAGAGGATGAGGCTTCTAGAGGAAGACAACGACTACGAGAACGAAGAAGAAGAAAAAGAAGAGGTACCGGAACCGCCTCAGCCTGCGGAGGACGCTAAGCCTATTGGCGAACCCGTTAGGATATCAGGAAAAGGAAGAGGCAGGAAAAGACACTATGTCTCCTTCGAGTTCGATGGCATCCAATATACTCTCGAGGACCCTGTTCTTCTTGTACCCGAGGAGAAAGGCCAAAAGCCATATGTCGCAATTATTAAGGACATTACGCAGTCTAACAGTGGCAACGTCAAAGTGACAGGGCAGTGGTTTTATCGCCCAGAAGAAGCTGAGAAAAAAGGTGGTGGAAACTGGCAATCGTGTGATACAAGGGAGCTGTTTTATAGTTTTCATCGTGATGATGTTCCTGCGGAGGCTGTAATGCATAAGTGTGTGGTGCATTTTGTTCCCAGACACAAACAGCTTCCGAAACGGAAGGATCACCCTGGGTTTATTGTACAGAAGGTGTATGACACTGTGGAAAGAAAACTCTGGAGGCTGAGTGATAAGGACTACGAGGATATTAAGCAGCAAGAAATTGATGTGCTTGTTCAAAAGACTCTGGAACGTATTGGTGAACTTCTTGACATTGAGCCTAAGGAGGAAGCCCCTGATGATGACGAGGACCAGATGAAACAAGGAAAAAGCTTGAGGAGAAAGAGTGTTTCCCCTCCCAATGTTTCAAAGGAAGAGGAAGAAACACTCAGGAGTGAACTAAATCCAAAGTCAGAAACACCAGTGAGTTCTGTAACTAATGCCTCAGAGTATTATCGCATATTGGTAGAATTCAACGCACTAACTGGAGATAGCCATCGTGACAAATGGTTGGAGAGGTTGCTTCAACGCATTCAGTACATGTGTGATTCTAATGATAGCAAAGAAATGGTGAAAGTATTAGGAAATGTCAATTCTGATGAAATCAACTGCAGAACCAAGCAGAGAAGTTCAGAATCAGTAAATGACTGTCAAGATAAGAGTTCCAAGTCTTTTATCTGGCCAGATGCTGCTGTTTCAGCCATAGTTTCTCTCGAAAAAGCTTCACATGATGCTCTCTCATCAGATTCTATGAAGTATAACCAAAAATTGCGGCAATTGGCATTTAATCTCCAGAAGAATGCAGTGTTAGCACGCGGTCTATTAAATGGAGAGTTGGAACCTTCAAAAATATTAAATATGACACCCAATGAATTAAAGTGTTACGAACTTACTCAACTGTCCCCTTCACTCTTCGATTCTCTATGCTACCCTTCCTTCCACTTTCACGGTGCGCTAGGGGTGATTGCTGTTAAGGAGGGTTTGGTTGCTGACAAAAGAACCAAGGAGAAGCCTGACGAGACCCAGCACTTGCAAATGACAGATGGCCGCTGCTCAAAATGTATGGAATGTAAGGTGGGCTTGAGAGAGATTATCCATGCTGGAAATAATGAACGATATCAGTTGGAATGCGTTTCCTGCGGTCATTCCTGGTATGCCTCTCGAGATGAGGTGTCTATGCCTACCATAGATGCATCTGATTCAAAAAGAAATATAGGCACTACGCCATAG 1656 0.4463 MVNRRRLSRVATSDDEDEVPLPQRTRKRMRLLEEDNDYENEEEEKEEVPEPPQPAEDAKPIGEPVRISGKGRGRKRHYVSFEFDGIQYTLEDPVLLVPEEKGQKPYVAIIKDITQSNSGNVKVTGQWFYRPEEAEKKGGGNWQSCDTRELFYSFHRDDVPAEAVMHKCVVHFVPRHKQLPKRKDHPGFIVQKVYDTVERKLWRLSDKDYEDIKQQEIDVLVQKTLERIGELLDIEPKEEAPDDDEDQMKQGKSLRRKSVSPPNVSKEEEETLRSELNPKSETPVSSVTNASEYYRILVEFNALTGDSHRDKWLERLLQRIQYMCDSNDSKEMVKVLGNVNSDEINCRTKQRSSESVNDCQDKSSKSFIWPDAAVSAIVSLEKASHDALSSDSMKYNQKLRQLAFNLQKNAVLARGLLNGELEPSKILNMTPNELKCYELTQLSPSLFDSLCYPSFHFHGALGVIAVKEGLVADKRTKEKPDETQHLQMTDGRCSKCMECKVGLREIIHAGNNERYQLECVSCGHSWYASRDEVSMPTIDASDSKRNIGTTP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00302 551 SMART BAH_4 86 205 IPR001025 GO:0003682
Spst2g00302 551 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 435 - -
Spst2g00302 551 CDD BAH_plant_3 68 214 - -
Spst2g00302 551 Pfam BAH domain 87 201 IPR001025 GO:0003682
Spst2g00302 551 Gene3D - 336 436 IPR036575 GO:0006351
Spst2g00302 551 MobiDBLite consensus disorder prediction 8 35 - -
Spst2g00302 551 MobiDBLite consensus disorder prediction 232 285 - -
Spst2g00302 551 MobiDBLite consensus disorder prediction 1 70 - -
Spst2g00302 551 ProSiteProfiles BAH domain profile. 86 205 IPR001025 GO:0003682
Spst2g00302 551 Gene3D - 69 302 IPR043151 -
Spst2g00302 551 MobiDBLite consensus disorder prediction 261 276 - -
Spst2g00302 551 SUPERFAMILY Elongation factor TFIIS domain 2 303 435 IPR036575 GO:0006351
Spst2g00302 551 ProSiteProfiles TFIIS central domain profile. 308 435 IPR003618 GO:0006351
Spst2g00302 551 SMART mid_6 306 445 IPR003618 GO:0006351
Spst2g00302 551 MobiDBLite consensus disorder prediction 36 50 - -
Spst2g00302 551 Pfam Transcription factor S-II (TFIIS), central domain 304 441 IPR003618 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00302 Spst-Chr2 2317350 2324166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00302 - - gmx:100776280 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00302 2 2317350 2324166 Spst3g01102 3 14438285 14444570 PCT