Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00028 ATGTCTAGGTTGCCCACCTTATCTCTGTTATTGCTCCTTCTCCAATGTCCTCTCTCATCCCTCTCAAACTCTCAAGGAGACGCTCTTTATGCTTTCAGCAGAAGGCTTTCTGACCCCAACAACGTTCTGGAGGGCTGGGACCCAACTCTCGTTGATCCTTGTACTTGGTTTCATGTCACCTGTGACTCCAACCATAACGTCTTTCGCCTTGACTTGGGCAATCATAATTTCACTGGAACTTTGGGCCCAGAACTTGGCCAACTGCCCTACCTTCAGTATCTGGAGCTCTACGGCAATAAGTTTAGTGGGAAGATTCCTCAGGAACTTGGTAACTTGATAAACCTCATTGGCATGGACTTGTCAAATAACCAATTGGAAGGAAGCATCCCAAACTCATTTGGCAAGTTGAAGTCTCTTAAATTCTTATGGCTAAACAACAACGAGTTGACAGGATCAATCCCAAGAGAGATCACTCTTCTTAAAAATCTCGTAGTCTTTTTTGAGAATAACAAATTCAGCGGCCCAGAGGGGAAAGGACTGGTTCCTTAG 549 0.4481 MSRLPTLSLLLLLLQCPLSSLSNSQGDALYAFSRRLSDPNNVLEGWDPTLVDPCTWFHVTCDSNHNVFRLDLGNHNFTGTLGPELGQLPYLQYLELYGNKFSGKIPQELGNLINLIGMDLSNNQLEGSIPNSFGKLKSLKFLWLNNNELTGSIPREITLLKNLVVFFENNKFSGPEGKGLVP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00028 182 FunFam Somatic embryogenesis receptor kinase 1 21 179 - -
Spst2g00028 182 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Spst2g00028 182 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 176 - -
Spst2g00028 182 SUPERFAMILY L domain-like 22 167 - -
Spst2g00028 182 Pfam Leucine rich repeat 89 149 IPR001611 GO:0005515
Spst2g00028 182 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Spst2g00028 182 ProSiteProfiles Leucine-rich repeat profile. 138 160 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00028 Spst-Chr2 320010 321623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00028 22 174 Receptor kinase-like Gene Family AT1G34210 55.844 1.35e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00028 - - gmx:100777352 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00028 2 320010 321623 Spst2g00028 2 320010 321623 ECH
Spst2g00028 2 320010 321623 Spst10g01271 10 13418613 13420833 PCT