Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01271 ATGGCACCTTTCATTTTCCTCAGTTTGTTGTTTCTCTTTCTCCATTACCCCCTCCTATCCCTCTCAACCAACCCTGAAGGGAACGCTTTGCATGCTTTGAGAAGCAGGCTTTTTGATCCCAACAATGTGTTGCAGAGTTGGGACCCAACACTGGTTAATCCCTGTACTTGGTTCCATGTTACCTGTGACTCCAACAATCATGTGATTCGCTTAGACTTGGGCAACTCTAACGTTTCTGGGACTCTGGGCCCAGAACTTGGCCAGCTACAGCATCTGCAGTTCTTGGAGCTCTACAGAAATGACTTAACAGGAAAGATTCCTGAGGAACTTGGTAACTTGAAATCACTAATTAGCATGGATTTGTATGATAACAAGTTGGAGGGGAAGATTCCAAAGTCCTTTGGAAAGTTGAAGTCACTTAAATTCCTGCGGCTAAACAGCAACAAGTTGACGGGATCTATCCCAAGAGAACTCACCCATCTTACTGATCTCAAAATCCTTGATGTTTCTAATAATGACCTCTGTGGAACAATACCAGTAGAAGGAAACTTTGAATCTTTCCCAATGGAAAGTTTTGAAAATAACCGGTTTAGTGGTCCTGAGCTGAAAGGACTTGTTCCATATGATTTTGGATGCTGA 639 0.4288 MAPFIFLSLLFLFLHYPLLSLSTNPEGNALHALRSRLFDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVSGTLGPELGQLQHLQFLELYRNDLTGKIPEELGNLKSLISMDLYDNKLEGKIPKSFGKLKSLKFLRLNSNKLTGSIPRELTHLTDLKILDVSNNDLCGTIPVEGNFESFPMESFENNRFSGPELKGLVPYDFGC 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01271 212 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 190 - -
Spst10g01271 212 FunFam Somatic embryogenesis receptor kinase 1 22 207 - -
Spst10g01271 212 SUPERFAMILY L domain-like 25 200 - -
Spst10g01271 212 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Spst10g01271 212 Pfam Leucine rich repeat 119 174 IPR001611 GO:0005515
Spst10g01271 212 Gene3D Ribonuclease Inhibitor 23 203 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01271 Spst-Chr10 13418613 13420833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01271 4 195 Receptor kinase-like Gene Family AT1G71830 61.458 3.70e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01271 - - gmx:100306422 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01271 10 13418613 13420833 Spst10g01271 10 13418613 13420833 ECH
Spst2g00028 2 320010 321623 Spst10g01271 10 13418613 13420833 PCT