Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00022 ATGGAAGCTGAAGGGCGTACAAATTCGAACTTGAAGATTAGGTTTAGAGAAGAAGGTGGGAGGCACTGGACTAATGCCCTTCCCATAGGCAATGGACGCCTCGGAGCCATGATCTGCGGCAACCTCCATTCCGAAACCATTCACCTCAATGAGGACACGCTCTGGACCGGGACACCCGCAGACTACACTGATTCTAAAGCTCCACAAGCACTTTCTCTGGTTAGAAACCTCGTTGACCGTCAACACTATCCACAAGCCACTGCTGCTGCTTCTGCCTTAACAGGACCGAATCCATCCGAGGCCTACCAACCTCTGGCCGATATCAAATTGGACTTCGATTATTCCCATTTCACCTGCGCCCAACAAACTTACGAGAGGGAACTGGACTTGGACACTGCTACTGTCAAAGTCAGCTATTCCGTTGGAGATGTCCAATTCAAAAGGGAACACTTTGCCTCCTATCCAGATCAAGTCATTGTCACTAATATTTCCGCCACCCAAAATGCCAAACTTTCATTTACACTTTCTCTGCACAGCAAATTGATTAATCAAACCTACATAAATGGCACCAATCAAATTATAATGAAGGGTGTGTGTCCTGCTAAAAGGGTCTCACCTCAATTCCAACACAGCGCACAAGATACTCCACAGGGGATTCAATTCTCGGCAATTCTTGATTTGAACATTGGTGGTACAAATGGCGTCATCAGTATGTTGGACGACAACAAGTTGAAGGTTGAGGCTTCAGATTGGGCTGTTTTCCTTCTCGTTGCTTCGTCCTCCTTCAGTGGCCCATTTACCGCACCTTCAGATTCTAAAAAGGATCCTACTTCCGAGTGTTTCGGTATATTGAGCTCAATAAACAATGTATCATATTCTGATCTCTATGCACGCCATTTAAATGACTATCAAGACCTTTTTCACCGGGTATCGCTGAAGCTTCCGAGAAGCACGCAGCGGAATATATCAGAAGATAGCTCTTTGGAATTGGAGAGGCTTGCGCCGACTGTAGCTGACCTGTCTCTAGTGGACAGTGTAACACAAGTTTCAACCTCTGACAGGGTGAAATCATTTCAGACAGATGAAGATCCATCCTTGGTGGAGCTTCTATTTCAATATGGTCGATATTTGCTTATTTCTTCTTCGCGTCCTGGAACTCAGGTGGCAAATCTACAGGGAATTTGGAACAAAGATATTGAGCCAGTTTGGGATGGAGCTCCTCACTTGAACATCAATCTTGAAATGAACTATTGGCCTGCTCTTCCTTGCAATCTTAGCGAGTGTCAAGAACCATTGTTAGATTATATTTCCTCTCTGTCTGTGAATGGCAGTAAAACTGCATATGTGAATTACCAAGCCAGTGGGTGGGTGGCACATAGTAAATCAGATATATGGGCAAGAACATCAGCAGGTCATGGTGATGTTCTGTGGGCCTTGTGGCCAATGGGTGGAGCATGGCTCTGTACTCATCTATGGGAGCACTATGCATACACAATGGATAAGGATTTCCTTAAATATAAAGCATATCCCATAATGGAAGGATGTGTCTCATTTCTGTTGAGTTGGCTGATAGAAGACAATGAAGGATATCTTGAAACTAATCCATCAACTTCCCCTGAACATAGTTTTATTGCTCCCAACGGTGAGCCTGCTTGTGTAAGCCAGTCATCCACAATGGATGTGGCCATCATACATGAAGTCTTCTCCACATTTCTTTCTGCTGCCAAGGTTACAGGGAGAACAGAGGATAATATTGTCAAAAAAGTTCGTGAAGCTCAACCACGGTTACGTCCAATCTATATTGCCCAAGATGGTTCCATAATGGAATGGGTGAAAGATTTCAAGGATCCAGAGGTACATCACCGGCACCTTTCACATCTATTCGGTCTATTTCCTGGGCATACAATTACTTTTGAGAATACTCCAGCCCTGTTTGAAGCTGCTGAGAAAAGCCTCTATAAACGAGGAGAGGAAGGTCCTGGATGGTCAACCACATGGAAAACTGCTTGCTGGGCGCGTCTACAGAACAGTTCTAATGCATATAAGATGATCAAGCGGTTGATCAACTTAGTGGATCCAGATCATGAGACACCATTTCAAGGTGGACTTTATAGCAACCTTTTTGCTGCACACCCACCATTTCAGATCGATGCCAACTTCGGTTTTGCAGCGGCAGTTGCAGAAATGCTTGTGCAGAGTACATTGAGCGATCTTTACCTACTTCCTGCTCTTCCCTGGGAGAAATGGCCAAATGGCTCCTTGAAAGGCTTGAAGGCTCGTGGAGGAACAACAGTTAACATATGCTGGAGAGAAGGGGATCTTCAGGAGGTTAGTATATGGTCGGAAGACCAAACAAGAACAACTCTGAGAAGAAGAATACACTACAGAGGAACCGTGATCACCGCAGACTTAGTGTCTGGCGTTTTTTACATGTTCAACGGACAGTTGAGGTGTTTGAAAACCTGCCCTTTTTCAGAAATAGCGTGTTCTTGA 2493 0.4481 MEAEGRTNSNLKIRFREEGGRHWTNALPIGNGRLGAMICGNLHSETIHLNEDTLWTGTPADYTDSKAPQALSLVRNLVDRQHYPQATAAASALTGPNPSEAYQPLADIKLDFDYSHFTCAQQTYERELDLDTATVKVSYSVGDVQFKREHFASYPDQVIVTNISATQNAKLSFTLSLHSKLINQTYINGTNQIIMKGVCPAKRVSPQFQHSAQDTPQGIQFSAILDLNIGGTNGVISMLDDNKLKVEASDWAVFLLVASSSFSGPFTAPSDSKKDPTSECFGILSSINNVSYSDLYARHLNDYQDLFHRVSLKLPRSTQRNISEDSSLELERLAPTVADLSLVDSVTQVSTSDRVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNKDIEPVWDGAPHLNINLEMNYWPALPCNLSECQEPLLDYISSLSVNGSKTAYVNYQASGWVAHSKSDIWARTSAGHGDVLWALWPMGGAWLCTHLWEHYAYTMDKDFLKYKAYPIMEGCVSFLLSWLIEDNEGYLETNPSTSPEHSFIAPNGEPACVSQSSTMDVAIIHEVFSTFLSAAKVTGRTEDNIVKKVREAQPRLRPIYIAQDGSIMEWVKDFKDPEVHHRHLSHLFGLFPGHTITFENTPALFEAAEKSLYKRGEEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPDHETPFQGGLYSNLFAAHPPFQIDANFGFAAAVAEMLVQSTLSDLYLLPALPWEKWPNGSLKGLKARGGTTVNICWREGDLQEVSIWSEDQTRTTLRRRIHYRGTVITADLVSGVFYMFNGQLRCLKTCPFSEIACS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00022 830 FunFam Alpha-L-fucosidase 2 249 730 - -
Spst2g00022 830 PIRSF UCP007663 1 813 IPR016518 GO:0004560
Spst2g00022 830 Gene3D - 251 730 IPR012341 GO:0005975
Spst2g00022 830 PANTHER ALPHA-L-FUCOSIDASE 2 5 821 - -
Spst2g00022 830 Pfam Glycosyl hydrolase family 65, N-terminal domain 20 263 IPR027414 -
Spst2g00022 830 SUPERFAMILY Six-hairpin glycosidases 274 783 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00022 Spst-Chr2 265866 271350 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00022 K15923 - gmx:100777878 1450.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00022 2 265866 271350 Spst2g00022 2 265866 271350 ECH
Spst2g00022 2 265866 271350 Spst10g01291 10 13552083 13557638 PCT