Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01291 ATGCTAACAGCTATCAGGCACAGATACGAGCTTCTGCTACTCCACCGACTTCTTCTTTACTTTGTCTTCTCTTGCTCGCTATGTTGGGCAATGCAAGATGGAGAACGGGTTATGGTGCGCAACACCCCACAGAGGAACTGGTGGAAGCCAACCTCAACGAATGTAGGGGACGAAGAGTCTCCTCCAAGGCCCTTGAAGGTTAGTTTTGCTGGGCCTGCAACGCACTGGACCGATGCCATCCCCATTGGCAATGGCCGTCTTGGTGCCATGGTTTGGGGTGGCGTACCCACCGAAGTTCTCCAGCTCAATGAGGACACACTTTGGACTGGGATTCCTGGAGATTACACCAACAAAAGTGCTCCACAAGCACTGGCTGAAGTCAGAAAGCTTGTCGATGATAGAAAATTCTCTGAAGCTACAGCAGCAGCTGTCAAGTTGTCAGGAGAGCCTTCCGATGTATACCAACTTCTCGGTGATATCAAGATAGAGTTTCATGAGTCTCATCATAAATATTTGAAGGAGTCATATTACAGGGAGCTGGATTTGGATACTGCAACGGCAAAAATAAAATACTCTGTGGGCGATGTTGAATTTAGGAGAGAACATTTTGTTTCGAATCCGGACCAAGTCATAGTGACAAGGTTTTCTGCAAGCAAACCTGGGTCACTATCATTTACAGTATATTTTGATAGCAAAATGCATCATGATTCAAGGGTAAGTGGCCAAAATCAGATAATAATTGAAGGGAGATGTCCTGGTAGTAGGATTCGACCAAGAGTGAATTCAATTGACAATCCAAAGGGAATTCGGTTTTCTGCAGTTTTTGATATGCAGATTGGTAAAGGGGTTATAAAAGTTTTGGATGATAGGAAGCTAACAGTTGAAGGTTCAGATTGGGCTATTTTGCTTTTGACAGCTTCTTCTTCCTTTGACGGCCCATTTACTATGCCTGAAGAGTCTAAGAAGGACCCTACTTCTGAGTCCCTCAGTAAAATGAAGTCTGTGAAGAAATTTTCATATGCTGATCTTTATGCACGCCACTTGGATGACTATCAAAATCTATTTCATCGTGTCTCATTGCAACTCTCTAAAAGCTCCAAGGGTGATTTAGGAAAGTCTATTTTTTACAAAAGGCAATCGGTTTCCTCCCAAACAAATATCTCTCAAAAGGGAGGTGATACCATTCCAACTTCAGCCAGAGTCAAATCTTTTCAGACTGATGAAGATCCTTCCTTTGTTGAGCTTTTGTTTCAATATGGTCGATATCTGCTAATCTCTTGTTCACGTCCTGGATCTCAGGTGGCAAACCTACAGGGTATCTGGAACAAAGATGTTGAGCCTGCATGGGATGGTGCTCCTCACTTGAACATTAATCTTCAAATGAATTATTGGCCAGCCCTTTCTAGCAACCTACATGAGTGTCAAGAGCCCTTATTTGATTTCATTTCCGCTTTGTCAGTCAATGGTAAAAAAACTGCAAAGGTGAACTATGAAACAAATGGTTGGGTTGCACATCAAGTTTCTGATATATGGGCTAAATCATCACCAGATAGAGGTGAGGCGGTTTGGGCTTTATGGCCTATGGGTGGAGCTTGGCTTTGTGCCCATTTATGGGAGCATTATACTTATACAATGGACAAAGATTTTCTTAAAAATAAAGCATACCCTTTGTTGGAAGAATGTACATCATTTTTGTTGGATTGGTTGATTGAAGGCCGTGGTGGATTATTGGAAACTAATCCATCAACTTCACCAGAGCACATGTTCACTGCACCAGACCGAAAGCCTGCTAGTGTGAGCTACTCATCAACCATGGACATTGCAATCATAAAAGAAGTTTTCTCTATAATGATTGCTGCTGCTGAGGTTTTGGGAAGACATGACGATGCTATTATCGAAAGAGTCACTGAGTATCAGTCTAAGCTTCCTCCGACAAAAGTTGCTAGAGATGGTTCCATTATGGAATGGGCAGAAGATTTTGAGGACCCAGATGTACATCATCGACATGTTTCTCATCTGTTTGGACTATTTCCAGGGCACACGATTAGTCTCGAGAAGACTCCAGGCATCTGTAAAGCTGTGGAATTTAGTCTAATTAAAAGAGGAGATGATGGTCCAGGATGGTCGACAACTTGGAAAGCTTCACTATGGGCACATCTTCACAATAGTGAACATGCATATCGTATGATAAAACACTTGATTGTCTTGGTGGACCCTGATCATGAAAGTGATTACGAAGGAGGACTTTACAGCAACCTGTTCACAGCTCATCCCCCCTTCCAGATTGATGCCAACTTTGGTTTTTCAGGAGCAATAGCAGAAATGCTTGTTCAAAGCACAATGAAGGACCTCTACTTGCTTCCAGCGTTGCCACGCGATAAATGGGCCAATGGTTGTGTGAAAGGATTGAAAGCTCGTGGTGGGGTGACAGTCAACCTTTGCTGGAAAGAAGGAGATCTGAGTGAAGTTGGGCTTTGGTCAGAAAGACAGAATTCCCAAGTGAGACTACATTATAGAGGAACCATGGTCTTAACAAGTTTATCACCTGGCATAGTTTACTCTTATAATAACCTGTTGAAGTGTGTGAAGACATACTCCCTCAGCAAAGTTAATCCTTGA 2619 0.428 MLTAIRHRYELLLLHRLLLYFVFSCSLCWAMQDGERVMVRNTPQRNWWKPTSTNVGDEESPPRPLKVSFAGPATHWTDAIPIGNGRLGAMVWGGVPTEVLQLNEDTLWTGIPGDYTNKSAPQALAEVRKLVDDRKFSEATAAAVKLSGEPSDVYQLLGDIKIEFHESHHKYLKESYYRELDLDTATAKIKYSVGDVEFRREHFVSNPDQVIVTRFSASKPGSLSFTVYFDSKMHHDSRVSGQNQIIIEGRCPGSRIRPRVNSIDNPKGIRFSAVFDMQIGKGVIKVLDDRKLTVEGSDWAILLLTASSSFDGPFTMPEESKKDPTSESLSKMKSVKKFSYADLYARHLDDYQNLFHRVSLQLSKSSKGDLGKSIFYKRQSVSSQTNISQKGGDTIPTSARVKSFQTDEDPSFVELLFQYGRYLLISCSRPGSQVANLQGIWNKDVEPAWDGAPHLNINLQMNYWPALSSNLHECQEPLFDFISALSVNGKKTAKVNYETNGWVAHQVSDIWAKSSPDRGEAVWALWPMGGAWLCAHLWEHYTYTMDKDFLKNKAYPLLEECTSFLLDWLIEGRGGLLETNPSTSPEHMFTAPDRKPASVSYSSTMDIAIIKEVFSIMIAAAEVLGRHDDAIIERVTEYQSKLPPTKVARDGSIMEWAEDFEDPDVHHRHVSHLFGLFPGHTISLEKTPGICKAVEFSLIKRGDDGPGWSTTWKASLWAHLHNSEHAYRMIKHLIVLVDPDHESDYEGGLYSNLFTAHPPFQIDANFGFSGAIAEMLVQSTMKDLYLLPALPRDKWANGCVKGLKARGGVTVNLCWKEGDLSEVGLWSERQNSQVRLHYRGTMVLTSLSPGIVYSYNNLLKCVKTYSLSKVNP 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01291 872 FunFam Alpha-L-fucosidase 2 297 776 - -
Spst10g01291 872 PIRSF UCP007663 38 869 IPR016518 GO:0004560
Spst10g01291 872 Gene3D - 301 776 IPR012341 GO:0005975
Spst10g01291 872 PANTHER ALPHA-L-FUCOSIDASE 2 51 865 - -
Spst10g01291 872 Pfam Glycosyl hydrolase family 65, N-terminal domain 69 312 IPR027414 -
Spst10g01291 872 SUPERFAMILY Six-hairpin glycosidases 323 827 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01291 Spst-Chr10 13552083 13557638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01291 K15923 - gmx:100817294 1568.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01291 10 13552083 13557638 Spst10g01291 10 13552083 13557638 ECH
Spst2g00022 2 265866 271350 Spst10g01291 10 13552083 13557638 PCT