Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03655 ATGAAACTCAAGTATGTTTCTTCCATTGCGGAGGACGTCATCAATAGATGTGCACAGAAACTGGATACTTCGGTAGAGACTTTGGTGGAAGATTTTGAAGAGGAATGGAAACCTGATATGGGAAACTATTGCAGAAAATTAGTTGAATTTTGCAGTGGGAAGGCTGTGAGTGAAATGTGCGGCAACATGAAGGGAAACATCAAGGATGGCTCGTTTAGCAGGTTGACATATGACATGATGCTTGCCTGGGAGAGACCTAGCTACTATGATGAAGAACATACGGAGACTATAGCAAAGGCCAAAGAAGAAAGGAAGATAACTAAGAATACTATTGAAGAACAGGATGATATCCCTCTGTTTTATTCAGACATCATGCCTCTCCTTGTTAATGATGAGCCCAATGTTGGAGAAGATTCATTTGTTTGGCTGGGATCATTAGTACCATTAGTTGCAGATGTAGCAAATGGAAGGTTTACTTTTGAAACTCTAACAGCATCAACAGGCCACAGGCTACATTTTCCAGCATATGACAAGTTCTTGAAAGAAATGGACAAGTGCATACGACATCTGCAGAAACAGGCAAAACCAAATGGGGTGGAACTGGCTGAGGATGAATATATATTACATGTAGATGGAACAGTCGTCAGTCAGAGAGTAGTTCGCCACATTGGAACAACAAGTTGGCCTGGTAGGCTTACCCTGACCAATTACTCTCTTTACTTTGAGGCTTCCGGAGTAATCAAGTATGAAGATGCTCTCAAGATAGACCTCTCCAAGAATGTTGAGCAGAGTGTTAATCCTTCTGCCACAGGTCCATGGGGAGCTCAACTTTATGACAAAGCCATAGTCTATGAGTCAGCTGATTTTCATATCCTGGTTCTGCCTAAGTTTGCTTGTACCACCTTAATATCAGAGACAATTGTACTGGAGTTTCCAGAGCTTACAAGTTCCACAAGACGTGATCATTGGCTTGCGCTAGTAAGGGAAATAATGTTTCTCCACAAGTTTTTATTGAAGTACCAGATAAAAAGCCCAGTACAGATATGGGAGATGCATGCAAGGACAATGTTGGGAATCATAAGGCTGCATGCAGCAAGAGAAATGCTAAGAATATCACCTCCTGTCCCAACAAAATTCTTAATATTTTCCTTATATAACGAAATACCAAAAGGAGATTACGTGTTAGAAGAGCTTGCGGATAGCCTCAATAGCCTCAATAAGAGCAATAATGAACAGTCTTGTAGTGCAAGTACTATCCTTAGGAGTATGAACATTTCTAAGACAATAGTTTCTGATGTAATAATAGATGAGGCAAGTCAAGCAGATGGAAGTGTTCATGTAGGCGGAAGTCCCTCATTGATCTCATTCGAGACCTCATTGGAGACCGCTATCCAACAATCTAGGGAGGAAGAAAAGGAAATTCTCGTTGCTAAAGCTACCACTGAAGAATTAAAGGAGGAGGGAGTCATTGACAGTGTTCTGGTTATAACGGCATTTGCAACTTTCTTGATTTGGGCAATAAAAAAGATGGTTCAGGCAAGGAAAAACAAGATTTATGAAAAATGCAACGAGATAGTAATCAGCAGATCTAATATGGCTTCTGATCAGTCTACGATGGAGAGCATTGTCTCAGCCCAGCAAGGATTGTACACTGTTCATGAGATGATGCAGATAGCAAACATAGCAATGCTAAAGATATGGTCAATACTTATTTCAAAAGCTGAGAAGCATGCAAATTTAGTGATGTTGGCAATGGGTGGGTTGGCGATCTTATTGGCTGTGATTCCATTCAAATTCTTCCTTATGGGTCTCATTATCCAAAGCTTCACTATGACATCAAGAAAGTCCTCTGAATCAGGGAATAGAAGGTTGAGGGAATGGTGGGACGCAATACCAATCGTTCCTATTCGTGTAGTAGACGATGTTCCTAACACCGGTGGTGACAACCTTGCTTCTTAG 1959 0.4099 MKLKYVSSIAEDVINRCAQKLDTSVETLVEDFEEEWKPDMGNYCRKLVEFCSGKAVSEMCGNMKGNIKDGSFSRLTYDMMLAWERPSYYDEEHTETIAKAKEERKITKNTIEEQDDIPLFYSDIMPLLVNDEPNVGEDSFVWLGSLVPLVADVANGRFTFETLTASTGHRLHFPAYDKFLKEMDKCIRHLQKQAKPNGVELAEDEYILHVDGTVVSQRVVRHIGTTSWPGRLTLTNYSLYFEASGVIKYEDALKIDLSKNVEQSVNPSATGPWGAQLYDKAIVYESADFHILVLPKFACTTLISETIVLEFPELTSSTRRDHWLALVREIMFLHKFLLKYQIKSPVQIWEMHARTMLGIIRLHAAREMLRISPPVPTKFLIFSLYNEIPKGDYVLEELADSLNSLNKSNNEQSCSASTILRSMNISKTIVSDVIIDEASQADGSVHVGGSPSLISFETSLETAIQQSREEEKEILVAKATTEELKEEGVIDSVLVITAFATFLIWAIKKMVQARKNKIYEKCNEIVISRSNMASDQSTMESIVSAQQGLYTVHEMMQIANIAMLKIWSILISKAEKHANLVMLAMGGLAILLAVIPFKFFLMGLIIQSFTMTSRKSSESGNRRLREWWDAIPIVPIRVVDDVPNTGGDNLAS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03655 652 Coils Coil 97 117 - -
Spst1g03655 652 Coils Coil 467 487 - -
Spst1g03655 652 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 3 496 - -
Spst1g03655 652 Pfam Plant protein of unknown function (DUF639) 494 641 IPR006927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03655 Spst-Chr1 46234163 46239965 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03655 - - gmx:100783299 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03655 1 46234163 46239965 Spst1g03655 1 46234163 46239965 ECH
Spst4g00357 4 4357507 4365170 Spst1g03655 1 46234163 46239965 PCT