Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03221 ATGATGCAGTTCAGAGCGTTGATGCAAGTGACGCGTAGTAAATCGCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTTCACAATCCGTGTTTTCAGACGCTACACAAATCCATACTGATTTCTTCTCTCTCTGTTTTCATCTATCTATCTGTCCCTCTTTTCCTTCAAATCTTGCATCTTATTTCCACTTCCTCTTCTTGTTTCACTTTAATCATGTCGTTATTCTCTCTTATTTGAGTCAAAGGATTATCGCCATGTCAGTTGCACCAGTTGAGAGTATCCCCTCACTAAGCAGTGATCTCTTCTATGATATTTTTCGTCGACTTGATGGTGCAACATTGGCCAGTGCAGCATGTACCTGTGCAGCATTGTGTTCCATCTCAAAAGAAGAGAGTTTATGGGAGAACGTATGTTCATCTATGTGGCCTTCAACCAGTAGAGAGGATGTCAAAAGTTTAATATCTTCTGTTGGTGGATTCAGAAAATTTTATGCCGACTGTTTCCCGCTTATTGTAAACAAGGAGGTTGTAGAGTATCAACCGAACCACTATCTTGAGTACCCGGACAACTGGACTGAAGCTGAGTATTATGGGGACATGAATGAGTCTGAAAGCATCTCTCCATCAGATTTTGTTTCCATAATAGATATTAGGTTTAAGGGAAAACCAATATGTTCCAAAGTTCTCTGGGGAATTCCAAATGCAAATAGCTTTGATGGTTGGTTCTATAACTGCCCTTTCCGGATTGATTTTCTCACTTATGCAGATAGAGATGATAACAACGATGGAGATGTTCACCTTTCTGTGTCTGATGGCCTGCCACCAATTACATCCATGGAGAGGGAAAGGAAAGATGGGAAACTGTGGCGGGAGCTCTGTGAAGGGCTCCGGCTTAGTTGGATTATAGTAAATAGGAAAATAAAACAAGCTGCAAATCTTGCTAGCTGGAGCCCTGTTGGTGGTCAAAGACACTGGCCAACTGATAAGGATTTTGTTATTCGCTTTGGATCAGTTCTACCTGCCAAGGACATTCTTCCTTGTCAAGTAGTGGAGTGTATCCTTTTTATGAAGTTTAGAGTGGTTCACACCGAAGAAGACGGGGTCCAAACAACTCTTAAATTGACAGAGCTGAGCATGCAGTTGGAAGATATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCATATACTTAAGGAAGCACTTAGCAGCCGAAGGAGCAAAAATTATGGTGAAGTACTTGAGTCTTGTCACATGTATTCAAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGAAACGAAAGTAGGTTGGATAGACTTTGTATTTTGAGTGGCATTGCGGCGTTTTTGACGTTCTGGTATTGCGTTTTATAA 1374 0.4134 MMQFRALMQVTRSKSLSPSLSLSLSSQSVFSDATQIHTDFFSLCFHLSICPSFPSNLASYFHFLFLFHFNHVVILSYLSQRIIAMSVAPVESIPSLSSDLFYDIFRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPSTSREDVKSLISSVGGFRKFYADCFPLIVNKEVVEYQPNHYLEYPDNWTEAEYYGDMNESESISPSDFVSIIDIRFKGKPICSKVLWGIPNANSFDGWFYNCPFRIDFLTYADRDDNNDGDVHLSVSDGLPPITSMERERKDGKLWRELCEGLRLSWIIVNRKIKQAANLASWSPVGGQRHWPTDKDFVIRFGSVLPAKDILPCQVVECILFMKFRVVHTEEDGVQTTLKLTELSMQLEDMEGAHVNGRNSLHILKEALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFLTFWYCVL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03221 457 Gene3D - 74 178 - -
Spst1g03221 457 SUPERFAMILY F-box domain 90 163 IPR036047 GO:0005515
Spst1g03221 457 PANTHER F-BOX PROTEIN-RELATED 90 454 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03221 Spst-Chr1 40717403 40721165 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03221 - - gmx:100779902 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03221 1 40717403 40721165 Spst1g03221 1 40717403 40721165 ECH
Spst1g03221 1 40717403 40721165 Spst10g00039 10 424948 427489 PCT