Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02809 ATGGGTAGTGCTAGATGGGGTTCAGGGGCATCTTCATCCATCAAGCTCTTGCTGTTCATGGTGCCTCTCGTGCTCGTTGCAGGCCTTGTCTCTGTTTTGGGTCCTAACCCCTCTAGTTGGCTTTCCATTGCCAAGCCACCTGTGTTGTTATTGAACTCGGTCACTTCCTCAACTGGTAGTGGTGCTGTCACCACCCCTTCTCAGATGAAGCAGAGGGAAGGAGTAGTGGTGATGCCCGTGGATGATCGTGCTCGAGACAATGCTATCTCTGATGACACTCGCTTCAATCTCTCCTCTCCTCCTCCATTTTCTGTTCAGGCCACCACACAAACACCTCAACAACCTAACAAGGATGAACAAAATGTTTCCCAAACTTTGCCCAACATGACTTGTGTGAACGAGTCTTGTGTTCCACCAGAGAGGCCAAAGCTGCAGAGAAAAATCAGCATCTTGGATAGAACCGAAGCAGGTCTAATAAAAGCTCGAGCTGCAATTAGAGAAGCAAGAAACGGAAATCAAACACAAGATATAGACTATGTTCCTATTGGACCAATGTATATAAATGCTAATGCATTTCACAGGAGTTACTTGGAAATGGAGAAACAGTTGAAAGTATATGTGTACGAAGAAGGGGAGCCTCCAGTTTTCCATAACGGACCTTGCAAAAGCATATACTCGATGGAGGGAAATTTCATCCACGCTATTGAGATGAACGAGAAATTCCGAACAAGAGATCCTGAGAAAGCACAAGTGTTTTTCTTACCTTTTAGCGTAGCAATGTTGGTACAATTTGTGTATGTACGAGACTCTCACGACTTTAGTCCCATAAAAGAAACTGTCACGGATTACGTCAACATCATCGCAGGAAGATACCCGTATTGGAATAGAAGCCTTGGAGCTGATCATTTCTATCTTGCTTGCCACGATTGGGGGCCAGAGACTTCGCGTTCCGTTCCTAATTTGCAGGATAACTCTATACGTGTGTTGTGCAATGCAAACACTTCCGAGGGATTCAAGCCTTCCAAGGATGTCTCCCTGCCGGAGATTAATCTCCAGAGTGGTTCAATAAACGGTTTGATTGGTGGGCCGTCTGCTTCTAAACGCCCACTCTTGGCCTTCTTTGCTGGTGGGCTGCACGGCCCAATTCGGCCGGTTCTTCTTGAACAGTGGGAAAACAAGGACGAGGAGATGCAGGTTCACAAGTACCTTCCGAAGGGTGTGTCCTACTACGACATGCTGAGGAAGAGCAGGTTCTGCCTCTGTCCTAGTGGGTACGAGGTAGCAAGTCCCAGAGTAGTGGAGGCAATCTACACAGGGTGTGTTCCAGTGCTCATTTCGGATCACTATGTGGCTCCTTTCAGTGATGTTTTGAATTGGAAGTCCTTTTCCGTTGAGGTTTCGGTTGAGGACATTCCCAAATTGAAGGAAATTTTGTTGAGTATTTCTCCAAGACAGTATATAAGGATGCAGAGGAGAGTGGTACAAATAAGGAGGCACTTTGAGGTCCACTCTCCTCCCAAGAGATTTGACGTCTTCCACATGATCCTTCATTCTGTATGGCTTAGAAGATTGAACTTTAGAGTCCACCATGATCAATAG 1599 0.4622 MGSARWGSGASSSIKLLLFMVPLVLVAGLVSVLGPNPSSWLSIAKPPVLLLNSVTSSTGSGAVTTPSQMKQREGVVVMPVDDRARDNAISDDTRFNLSSPPPFSVQATTQTPQQPNKDEQNVSQTLPNMTCVNESCVPPERPKLQRKISILDRTEAGLIKARAAIREARNGNQTQDIDYVPIGPMYINANAFHRSYLEMEKQLKVYVYEEGEPPVFHNGPCKSIYSMEGNFIHAIEMNEKFRTRDPEKAQVFFLPFSVAMLVQFVYVRDSHDFSPIKETVTDYVNIIAGRYPYWNRSLGADHFYLACHDWGPETSRSVPNLQDNSIRVLCNANTSEGFKPSKDVSLPEINLQSGSINGLIGGPSASKRPLLAFFAGGLHGPIRPVLLEQWENKDEEMQVHKYLPKGVSYYDMLRKSRFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVAPFSDVLNWKSFSVEVSVEDIPKLKEILLSISPRQYIRMQRRVVQIRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRVHHDQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02809 532 MobiDBLite consensus disorder prediction 90 122 - -
Spst1g02809 532 Pfam Exostosin family 200 479 IPR040911 -
Spst1g02809 532 MobiDBLite consensus disorder prediction 91 122 - -
Spst1g02809 532 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 27 519 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02809 Spst-Chr1 36644112 36647194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02809 - - gmx:100806269 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02809 1 36644112 36647194 Spst1g02809 1 36644112 36647194 ECH
Spst1g02809 1 36644112 36647194 Spst7g00962 7 16276858 16287664 PCT