Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02794 ATGGATCGCCTTTCTTCCAGTACCATTATCCCTGAAGCGTTCCAAGGCGCCAAAGATGACCTCACCATGCAACTTGCATTGGTTTGGAATCAAATCAAAGCGCCATTGATTGTCCCCTTGCTGAGACTAGCAGTGTTTCTGTGCTTGATCATGTCAGTGATGATGTTCATTGAGAGGGTCTACATGGGCGTTGTCATCACTCTGGTGAAGATGTTTGGGAGAAAGCCCGAGAAACGTTACAAATGGGAGCCAATGAAGGACGACATAGAGTTGGGAAACTCTTCTTACCCAATGGTCCTCGTTCAAGTCCCCATGTACAACGAAAGAGAGGTTTACCAGCTCTCAATTGGAGCTGCGTGTGGACTTTCTTGGCCTTCAGATAGGATCATCGTACAAGTCCTTGATGACTCCACTGACCCAACAATCAAGGAGTTGGTACAGCTTGAATGTCAGAGATGGGCAAGCAAAGGGGTGAACATAAAGTATGAGGTGAGAGACAACAGGAATGGGTACAAAGCAGGGGCTCTCAAAGAAGGCATGAAGCGTAGCTACGTGAAACAATGTGATTGTGTTGCAATCTTTGACGCTGATTTTCAACCAGAGCCTGATTTCTTGTGGCGCACCGTTCCATTCTTATTGCACAATCCCGAACTAGCCCTCATTCAAGCGCGGTGGAAATTTGTGAATGCCGATGAATGTTTGATGACCAGAATGCAAGAGATGTCACTGGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTATGCGTTCTTTGGTTTCAACGGGACTGCGGGAGTATGGAGAATTTCGGCTTTGAATGAGGCTGGTGGATGGAAGGATAGGACCACAGTGGAAGATATGGACTTGGCTGTGCGAGCCAGTCTCAAAGGATGGAAATTCTTATACTTGTCTGATTTGAAGGTTAAAAATGAATTGCCAAGCACTTTCAAGGCCTACCGTTACCAACAGCACCGTTGGTCTTGTGGTCCAGCCAATCTTTTTAGGAAAATGGTCGTGGAGATCATAAACAACAAGAAAGTGTCATTGTGGAAGAAAATACATGTGATATACAGCTTCTTCTTTGTTCGGAAGGTCGTAGCACACATCAACACCTTTGTGTTCTACTGCATTGTATTGCCTGCAACAGTTTTGGTGCCTGAGGTTGTGGTCCCAAAGTGGGGAGCTGTCTATATCCCTTCTGTCATCACTATTCTAAATGCAGTTGGAACTCCAAGGTCACTCCATTTGCTGGTCTTCTGGATTCTTTTTGAGAATGTCATGTCTCTGCACCGAACAAAGGCAACGATTATTGGTCTACTAGAGGCTAGTCGAGTGAACGAATGGGTTGTCACTGAAAAACTTGGTGATGCTTTCAAGGCTAAAGCTGGAGGTAAAGCTCCTAAAAAGCCTCGATTCAAGATTGGAGACAGGATTCACTTGTTAGAACTTGGGGTCGCATTCTACCTCTTCTTTTGTGGCTGCTATGACGTTATTTTCGGGAAAAACCACTTCTTCATCTTCCTCTTTATCCAATCTCTTGCCTTCTTCATCATGGCTTTTGGATATGTTGGCACCATTGTTCCCAACTCTTAG 1602 0.4501 MDRLSSSTIIPEAFQGAKDDLTMQLALVWNQIKAPLIVPLLRLAVFLCLIMSVMMFIERVYMGVVITLVKMFGRKPEKRYKWEPMKDDIELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIVQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDCVAIFDADFQPEPDFLWRTVPFLLHNPELALIQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVVEIINNKKVSLWKKIHVIYSFFFVRKVVAHINTFVFYCIVLPATVLVPEVVVPKWGAVYIPSVITILNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWVVTEKLGDAFKAKAGGKAPKKPRFKIGDRIHLLELGVAFYLFFCGCYDVIFGKNHFFIFLFIQSLAFFIMAFGYVGTIVPNS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02794 533 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Spst1g02794 533 Pfam Glycosyltransferase like family 2 98 332 - -
Spst1g02794 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 313 IPR029044 -
Spst1g02794 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 373 IPR029044 -
Spst1g02794 533 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 18 528 - -
Spst1g02794 533 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02794 Spst-Chr1 36505138 36509333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02794 1 532 Miscellaneous Gene Families AT5G03760 80.300 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02794 K13680 - gmx:100782772 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02794 1 36505138 36509333 Spst11g01242 11 36822103 36827109 ECH
Spst1g02794 1 36505138 36509333 Spst1g02794 1 36505138 36509333 ECH