Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01242 ATGGTTGATTCTGAACCAAAGTTCTTCATCCCGGAGTCAATCCAGGGCGTGAATTTCGACGTGACGGCGCAGTTGAGGATGGTGTGGGAGGTGATAAAGGCGCCGCTGATCGTGCCGCTGCTGAACGTGGCGGTGTACATTTGCCTCGCCATGGCCCTCATGCTCTTCATGGAGAGGGTCTACATGGGCATTGTCATCATCCTCGTCAAACTCTTCTGGAAGAAACCCCACCAACGCTACAAGTTCGAACCCCTCCAAGAGGATGAAGAACTCGGCAACACCAATTTCCCCGTCGTCCTTGTTCAGATTCCCATGTTCAATGAAAGAGAGGTGTACAAGGTGTCAATTGGAGCAGCTTGCAATCTCTCATGGCCTGCGGATCGTCTCGTGATCCAAGTGCTTGACGATTCTACTGACCCTACCATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGCAAGCAAAGGGATAAACATAACATATCAAATCAGAGAGACTCGAGGGGGGTACAAAGCTGGTGCTCTAAAAGAAGGCCTAAAACGAAGCTATGTCAAACCTTGCGAGTACGTGGCAATTTTCGATGCTGATTTCCGTCCAGAACCAGATTTTCTCAGACGTTCCATTCCTTTCTTGGTGGGCAACCCCGACATTGCTCTTGTTCAAGCTCGTTGGAGATTCGTGAATGCTGATGAGTGTTTATTGACAAGAATGCAAGAGATGTCCCTGGACTACCATTTCACTGTAGAGCAAGAAGTTGGGTCAGCTACTCATGCTTTCTTCGGTTTCAACGGAACTGCTGGTATTTGGAGAATAGCTGCTATTAATGAAGCTGGAGGGTGGAAAGACAGAACAACAGTGGAAGATATGGACCTTGCTGTTCGTGCCAGTCTTAGGGGATGGAAATTTTTGTACCTTGGAGACCTCCAGGCCAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTTAGATTCCAGCAGCACCGGTGGTCTTGTGGTCCTGCTAATTTGTTCCGCAAAATGGTTATGGAGATAGTAAGGAACAAGAAAGTTAAGTTTTGGAAGAAAGTGTACGTTATATACAGCTTCTTCTTTGTTCGCAAAATCATAGCTCACATGGTCACCTTCTTCTTCTTCTGTGTTGTGATTCCCCTCACAATCTTGATCCCTGAAGTTCATGTTCCAATATGGGGAGCTGTTTATATTCCTTCTGTCATCACCATTCTCAATTCAGTTGGAACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCTTTGCACCGTACCAAGGCAACATTTATAGGTCTCTTAGAGTATGGGAGGGCTAATGAATGGGTTGTGACTGAAAAACTTGGTGACTCTGTCAACAGTAATAACAAGAATAAATCAGGAGATGCTGCCAAGAAGAATAATGTCACCAAGGCCCCCAAAAAGACTCGATCCAAATTTGTTGAAAGACTTAATTTACTGGAGCTGGGATTTGCTGCATTCCTCTTCTTATGTGGGTGCTATGATTTTGTGCATGGGAAGCACAACTATTTCATCTACCTCTTCCTTCAGACCATAACATTCTCAATTGTAGGATTTGGCTACGTTGGCACCATCGTGTAA 1629 0.4549 MVDSEPKFFIPESIQGVNFDVTAQLRMVWEVIKAPLIVPLLNVAVYICLAMALMLFMERVYMGIVIILVKLFWKKPHQRYKFEPLQEDEELGNTNFPVVLVQIPMFNEREVYKVSIGAACNLSWPADRLVIQVLDDSTDPTIKQMVEMECQRWASKGINITYQIRETRGGYKAGALKEGLKRSYVKPCEYVAIFDADFRPEPDFLRRSIPFLVGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFFCVVIPLTILIPEVHVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVNSNNKNKSGDAAKKNNVTKAPKKTRSKFVERLNLLELGFAAFLFLCGCYDFVHGKHNYFIYLFLQTITFSIVGFGYVGTIV 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01242 542 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Spst11g01242 542 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 540 - -
Spst11g01242 542 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 380 IPR029044 -
Spst11g01242 542 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 316 IPR029044 -
Spst11g01242 542 CDD CESA_CaSu_A2 97 333 - -
Spst11g01242 542 Pfam Glycosyl transferase family group 2 190 396 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01242 Spst-Chr11 36822103 36827109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01242 1 542 Miscellaneous Gene Families AT5G22740 81.250 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01242 K13680 - gmx:100791645 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01242 11 36822103 36827109 Spst11g01242 11 36822103 36827109 ECH
Spst1g02794 1 36505138 36509333 Spst11g01242 11 36822103 36827109 ECH